KEGG   Rattus norvegicus (rat): 29213
Entry
29213             CDS       T01003                                 
Symbol
Tubb4a
Name
(RefSeq) tubulin beta-4A chain
  KO
K07375  tubulin beta
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04145  Phagosome
rno04540  Gap junction
rno04814  Motor proteins
rno05010  Alzheimer disease
rno05012  Parkinson disease
rno05014  Amyotrophic lateral sclerosis
rno05016  Huntington disease
rno05020  Prion disease
rno05022  Pathways of neurodegeneration - multiple diseases
rno05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    29213 (Tubb4a)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    29213 (Tubb4a)
  09142 Cell motility
   04814 Motor proteins
    29213 (Tubb4a)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    29213 (Tubb4a)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    29213 (Tubb4a)
   05012 Parkinson disease
    29213 (Tubb4a)
   05014 Amyotrophic lateral sclerosis
    29213 (Tubb4a)
   05016 Huntington disease
    29213 (Tubb4a)
   05020 Prion disease
    29213 (Tubb4a)
   05022 Pathways of neurodegeneration - multiple diseases
    29213 (Tubb4a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    29213 (Tubb4a)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    29213 (Tubb4a)
   04147 Exosome [BR:rno04147]
    29213 (Tubb4a)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     29213 (Tubb4a)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    29213 (Tubb4a)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   29213 (Tubb4a)
  Exosomal proteins of colorectal cancer cells
   29213 (Tubb4a)
  Exosomal proteins of bladder cancer cells
   29213 (Tubb4a)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 29213
NCBI-ProteinID: NP_543158
RGD: 619730
Ensembl: ENSRNOG00000047505
UniProt: A6KQR9 M0R843
Position
9:complement(2004836..2012281)
AA seq 444 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEGEFEEEAEEEVA
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgcgggaaatcgtgcacctgcaagccgggcaatgcggcaaccagatcggggccaagttc
tgggaggtcatcagtgatgagcatggcatcgaccccactgggacctatcatggggacagt
gacctccagctggagagaattaatgtctactacaacgaggccacaggtggaaattatgtt
cccagagccgtgctggttgacctagaacctggcaccatggactccgtccgctctggccct
tttggccagatcttccggccagacaactttgtgtttggtcaatctggagcaggcaacaac
tgggccaagggtcattacactgagggcgcagagttagtggatgcagtcctggacgtggtg
cgcaaagaggctgaaagctgcgactgtctccagggcttccagctcacccactcgctcgga
ggtggcacaggctcagggatggggaccttgctcatcagcaagatccgggaggagttccca
gacaggatcatgaatacgttcagcgtagtgccatcgcccaaggtgtctgacacggtggtg
gaaccctacaatgccacactgtctgtgcatcaactggtggagaacactgatgagacctac
tgtatcgacaatgaggccttgtacgacatctgcttccgcactctcaagctgaccacgccc
acctacggggacctcaaccacctagtgtcggccaccatgagtggggtgaccacctgcctg
cgctttcccggccagctcaatgcagatctacgcaagctggctgtgaacatggtgccgttc
ccccgtctccacttcttcatgccaggattcgcacccttgaccagcaggggcagccagcag
taccgagccctcaccgttcctgagctgacccaacagatgttcgatgctaagaacatgatg
gccgcgtgcgacccgagacacggtcgctacctgaccgtggctgctgtcttccgaggacgg
atgtccatgaaggaggtggacgagcagatgctaagtgtgcagagcaagaacagcagctac
ttcgttgagtggatccccaacaacgtcaagacagccgtgtgtgacatcccaccccgaggc
ctgaagatggcagccaccttcatcggcaatagcacagccatccaggagctgttcaaacgc
atctcagagcagttcaccgccatgtttaggcgcaaggccttcctgcattggtacacgggt
gaaggcatggacgagatggagtttacggaagcagagagcaatatgaacgacctggtgtcc
gagtaccagcagtatcaggatgccacggctgaagagggcgagttcgaagaggaggccgaa
gaggaggtggcttaa

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