KEGG   Rattus norvegicus (rat): 29214
Entry
29214             CDS       T01003                                 
Symbol
Tubb5
Name
(RefSeq) tubulin beta-5 chain
  KO
K07375  tubulin beta
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04145  Phagosome
rno04540  Gap junction
rno04814  Motor proteins
rno05010  Alzheimer disease
rno05012  Parkinson disease
rno05014  Amyotrophic lateral sclerosis
rno05016  Huntington disease
rno05020  Prion disease
rno05022  Pathways of neurodegeneration - multiple diseases
rno05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    29214 (Tubb5)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    29214 (Tubb5)
  09142 Cell motility
   04814 Motor proteins
    29214 (Tubb5)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    29214 (Tubb5)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    29214 (Tubb5)
   05012 Parkinson disease
    29214 (Tubb5)
   05014 Amyotrophic lateral sclerosis
    29214 (Tubb5)
   05016 Huntington disease
    29214 (Tubb5)
   05020 Prion disease
    29214 (Tubb5)
   05022 Pathways of neurodegeneration - multiple diseases
    29214 (Tubb5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    29214 (Tubb5)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    29214 (Tubb5)
   04147 Exosome [BR:rno04147]
    29214 (Tubb5)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     29214 (Tubb5)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    29214 (Tubb5)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   29214 (Tubb5)
  Exosomal proteins of colorectal cancer cells
   29214 (Tubb5)
  Exosomal proteins of bladder cancer cells
   29214 (Tubb5)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 29214
NCBI-ProteinID: NP_775125
RGD: 628596
Ensembl: ENSRNOG00000061216
Vega: OTTRNOG00000001525
UniProt: P69897 A6KT85
Position
20:2917577..2921726
AA seq 444 aa
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEEDFGEEAEEEA
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgagggaaatcgtgcacatccaggccggacagtgtggcaaccagatcggtgctaagttc
tgggaggtgataagcgatgaacacggcatcgaccccaccggcacctaccacggagacagc
gacttgcagctggaccgaatctctgtgtactacaatgaagctacaggtggcaagtatgtc
cctcgagctatcttagtggatctagaacccgggactatggactccgttcgctcaggtcct
tttggccagatcttcagaccggacaactttgtttttggtcagtctggggcaggcaacaac
tgggctaagggtcactacacagagggagctgagctggttgactctgtcttggatgtggtg
cggaaggaggcggagagctgtgactgcctgcaaggctttcagctgacccattcgctgggt
ggaggcacgggctctggcatgggcaccctgctcatcagcaagattcgagaagaatacccc
gaccgcatcatgaacacctttagcgtggtgccctcacccaaagtgtctgacaccgtggtt
gagccctacaacgccaccctgtccgtccaccagttggtagagaacacagatgagacctac
tgcattgacaacgaggccctctacgacatctgcttccgtacccttaagctcaccacgcca
acctacggagacctgaaccatctcgtctctgccaccatgagcggtgtcaccacctgcctc
cgtttcccgggccagctgaacgccgaccttcggaagctggctgtcaacatggtgcccttc
ccgcgtctccacttctttatgcctggctttgcccctctcaccagccgtggaagccagcag
taccgggccctcactgtgcctgaactcacccagcaggtcttcgacgccaagaacatgatg
gccgcctgtgacccacgccacggccggtacctcacggttgcggctgtcttccgtggacgg
atgtccatgaaggaggtagatgagcaaatgctcaacgtgcagaataagaatagcagctac
ttcgtggaatggatccccaacaacgtcaagacggctgtctgtgacatcccaccgcgaggc
ctcaagatggcagtcaccttcatcggaaacagcacggccatccaggagctcttcaagcgc
atctctgagcagtttacggcaatgttccgtcggaaggctttcctccactggtacacgggt
gagggcatggacgagatggagttcaccgaagctgagagcaacatgaatgacctcgtctct
gagtatcagcagtaccaggacgccaccgcagaagaggaagaggatttcggagaggaggca
gaagaagaggcctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (10)   
   KEGG PATHWAY (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (5)   
   Pfam (5)   
All databases (40)   

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