KEGG   Rattus norvegicus (rat): 292266
Entry
292266            CDS       T01003                                 
Symbol
Ccdc170
Name
(RefSeq) coiled-coil domain-containing protein 170 isoform X2
Organism
rno  Rattus norvegicus (rat)
SSDB
Motif
Pfam: ATG16 HAP1_N EFG_C
Other DBs
NCBI-GeneID: 292266
NCBI-ProteinID: XP_008756934
RGD: 1310945
Ensembl: ENSRNOG00000024280
Vega: OTTRNOG00000002329
UniProt: A0A1B0GWU6
Position
1:43351010..43458192
AA seq 671 aa
MSHSSSLGSGSPECPRNASPPEGTADHHPEVPVTREQLNHYRNVAENVQSELAAALVRFE
CAQSELRELRSKMLSKEVCCQELKAEMESYKENSARKSSLLVSLRGRIQELQEESAAFSA
SKIRAEASAHAMMKENQELMKKVLELDEKLQDCSKANEESKKQGSETLRRHEEFRTQLRD
CLSLDKKCEEAPDEDLVLKLKELCKENTSLKGQLTTLEETVSVHEMEAKANRETILRLAA
DVSREQTKAASWAEEKDKLNQDLLSAAEARTALEREAMLYQERLLASQRAWDASKQELNQ
LRKSCQQLDVSLKASREAATASQSQNACFREKLAALLCSRFDIAESTEDAILEKIRVLGI
EEENQKRMASQLEAQISELVGKLGNESESHQKALQRAHEAEKKLEALQGQLSHLEGELLS
GDVVRDNLNLEKQKYLKFLDQLSEKMKLGHIAADLGFDMRLDVVLARIEQLVHLESNAVI
ENKTMAHNLQRKLKTQKERLESKEVHMNLLRQKITQLQQEKEARSALAMERDEAHLSVRK
LEKKVERMQKELSSCQEYNTELKAKLADTSELKIKTLEQTKAIEDLNQSRGELEKMKENA
EKKLMLVMSELETTVQEAQANQERTRAMIELASSELRILKKSLDEAERREQQQMEIKREL
PNCSSADIKGL
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgagccacagcagttccttgggctccgggagtccggaatgcccccgcaacgcctcaccg
ccagagggaactgccgatcatcacccagaagtccctgttacccgggaacagctgaaccac
taccggaatgtggctgaaaatgttcaaagtgagcttgcagcggcgctggtcagatttgaa
tgtgctcagtccgagcttcgagaacttcgctccaagatgctttctaaagaagtttgctgt
caggagctgaaggcagaaatggagagctataaagaaaacagtgccagaaagtcctctctc
ctcgtctctttgaggggcagaatacaggagctccaagaagaatcagcagcgttttctgct
tctaaaatcagagcagaagcctctgctcatgccatgatgaaggagaaccaggaactaatg
aagaaagttctagaactggatgagaaattacaagactgttcaaaggcaaacgaggagtct
aagaaacaaggctcagagactctccggaggcatgaagaatttcgtactcagcttcgtgat
tgcttgagtctagacaagaagtgtgaggaggcaccggatgaagatttagtcttaaagctt
aaagagctgtgcaaggaaaacacatccctgaaaggacaactcactactcttgaagagact
gtaagcgtccatgagatggaggcaaaggctaacagagaaaccatcctgaggctggcagcc
gacgtcagcagggagcagacaaaggctgcctcctgggcagaggagaaagacaagctaaat
caggacttgctcagtgctgcggaggcaagaacagctctagaaagggaagctatgctctac
caagaacggctgcttgcgtctcagcgagcctgggatgcttcgaagcaggagttgaaccag
ctgaggaaaagctgccagcagctggatgtgagcctgaaggccagcagggaggccgccaca
gcctcacaaagccagaacgcctgcttcagggaaaaactcgcagctcttctttgcagcaga
ttcgacatagctgagtccactgaggacgccatattggagaagattcgagtgctaggcatt
gaggaagagaaccagaaaaggatggcctcccagcttgaagcccagatttccgagcttgtt
gggaagttgggaaatgaatctgagtctcaccagaaagccctacagagggcccatgaggca
gaaaagaagctggaggctcttcagggtcagctgagtcacctggagggagaactgctttct
ggagacgtcgtgagagacaacttgaatctagagaagcaaaaatacttgaaatttctggac
cagctgtcagagaaaatgaaattgggccacatagctgctgaccttggctttgacatgcgt
ctggacgtagttctagctcgcatagagcagctagtccaccttgagagcaatgctgtcata
gaaaacaagaccatggctcacaacttacagagaaagctaaagactcagaaagaaagactg
gagagcaaagaagtgcatatgaacctccttcggcagaaaattacccagctgcagcaggag
aaagaggcgcgctcggccttggccatggagagggatgaggcccatctttctgtgcggaag
ctggagaagaaagtggagaggatgcagaaggagttgagctcgtgtcaggagtacaacact
gagctcaaagccaaactggcggacaccagtgaactcaagattaaaactttggaacagacc
aaagccattgaagacttaaatcaatcccgaggtgagctggagaagatgaaggagaatgca
gagaaaaagcttatgctggtcatgtcagagctggaaactacagtgcaggaggctcaagca
aaccaggaaagaaccagggccatgatcgagttggccagcagtgagctgaggatcctgaag
aagtctctggatgaagcagagaggagagaacagcagcagatggagattaagagagagctg
ccaaactgttcgagtgcagatatcaaaggactgtag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (3)   
   Pfam (3)   
All databases (43)   

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