KEGG   Rattus norvegicus (rat): 292464
Entry
292464            CDS       T01003                                 
Symbol
Katna1
Name
(RefSeq) katanin p60 ATPase-containing subunit A1
  KO
K07767  katanin p60 ATPase-containing subunit A1 [EC:5.6.1.1]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    292464 (Katna1)
Enzymes [BR:rno01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.1  microtubule-severing ATPase
     292464 (Katna1)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     292464 (Katna1)
SSDB
Motif
Pfam: AAA KATNA1_MIT AAA_lid_3 Vps4_C RuvB_N AAA_5 AAA_33 TIP49 AAA_14 Mg_chelatase AAA_7 AAA_16 AAA_22 IstB_IS21 AAA_2 AAA_28 TsaE nSTAND3 AAA_18 RNA_helicase PhoH SRPRB AAA_17 TPR_1 Parvo_NS1 AAA_30 TPR_8 Sigma54_activ_2
Other DBs
NCBI-GeneID: 292464
NCBI-ProteinID: NP_001004217
RGD: 1303062
Ensembl: ENSRNOG00000014996
UniProt: Q6E0V2 Z4YNM2 A6JP17
Position
1:4022886..4064513
AA seq 493 aa
MSMSLLMITENVKLAREYALLGNYDSAMVYYQGVLDQINKYLYSVKDTHLHQKWQQVWQE
INVEAKHVKEIMKTLESFKLDSTSLKAAQHELPSSEGEVWSLPVPVERRPLPGPRKRQST
QHSDPKPHSNRPGAVVRAHRPSAQSLHSDRGKAVRSREKKEQSKGREEKNKLPAAVTEPE
ANKFDSTGYDKDLVEALERDIISQNPNVRWYDIADLVEAKKLLQEAVVLPMWMPEFFKGI
RRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMAR
FYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAA
TNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIAENMEGYSG
ADITNVCRDASLMAMRRRIEGLTPEEIRNLSREEMHMPTTMEDFEMALKKVSKSVSAADI
ERYEKWIVEFGSC
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgagcatgagtcttctaatgattactgagaatgtaaaattggctcgtgagtatgcattg
ctgggaaactatgactctgcaatggtctattatcagggagttcttgaccaaattaacaag
tatctatactcagtcaaagatacacacctccatcagaaatggcaacaggtttggcaggaa
ataaacgtggaagctaagcatgttaaggagatcatgaaaacactggagagctttaaactg
gacagcacttctttgaaagctgcacagcatgagcttccgtcctcggaaggagaagtctgg
tctttgccggtacctgttgaaaggagacccttaccaggacctaggaagcgccagtctact
cagcacagtgaccctaagccacacagtaaccggccaggcgcagtcgtcagagctcatcga
ccatctgcacagagtctgcacagcgacagaggcaaagctgttcgtagtcgtgaaaagaaa
gagcagagtaagggcagagaggaaaagaacaaattacctgctgcagttacagaaccagag
gcaaataaatttgatagcacggggtatgacaaggacttagtagaagctttggaaagagat
ataatttctcagaatcccaacgttcggtggtatgatattgctgatttagtagaagctaaa
aagttgcttcaggaagcagtggtgttaccaatgtggatgccagaattctttaagggcatt
aggagaccatggaaaggtgtgctgatggttggcccacctggcactggaaagaccctcctt
gctaaagcagttgccacagaatgcaagacaacgttcttcaatgtctcttcatccactctg
acttccaaatacagaggagagtctgagaagcttgtccgtcttctgtttgaaatggctcgg
ttttactccccagctaccatatttattgatgagatagattccatctgcagccgccgagga
acttctgaagagcatgaagcaagccgaagggtgaaagctgagctgctggttcagatggat
ggtgttggaggtgcctcagaaaatgacgacccttccaagatggtcatggttctggcggcc
actaatttcccatgggacatagatgaggctttaaggcgtcgtctggagaaaagaatctat
attccgttaccatcagcaaaaggcagagaagaactgttaagaataagtctacgagagctg
gaattggctgatgatgttaaccttgcaagcatagcagaaaacatggaaggctactcaggt
gcagacattaccaatgtatgcagggatgcgtccttgatggccatgagacgccgtattgag
ggtctaaccccagaagaaatccggaacctttcaagagaagaaatgcacatgcctaccacc
atggaggattttgaaatggctttaaagaaggtctccaaatcagtatcagctgcagacatt
gagagatacgagaaatggatagttgagtttggatcatgctag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (28)   
   Pfam (28)   
All databases (51)   

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