KEGG   Rattus norvegicus (rat): 292534
Entry
292534            CDS       T01003                                 
Symbol
Tsen34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
  KO
K15323  tRNA-splicing endonuclease subunit Sen34 [EC:4.6.1.16]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rno03016]
    292534 (Tsen34)
Enzymes [BR:rno01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     292534 (Tsen34)
Transfer RNA biogenesis [BR:rno03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    292534 (Tsen34)
SSDB
Motif
Pfam: tRNA_int_endo
Other DBs
NCBI-GeneID: 292534
NCBI-ProteinID: NP_001006969
RGD: 1359564
Ensembl: ENSRNOG00000059572
UniProt: A0A0G2K071 Q5XIB7
Position
1:complement(74432687..74440553)
AA seq 312 aa
MLVVEVANGRSLVWGAEAVQALRERLGVGGRTVGALPRGPRQNSRLGLPLLLLPEEARLL
AEIGAVTLVSAPRPDPRNHGLALASFKRQQEQSFQDQSTLAAEARETRRQELLEKIVEGQ
AAKKQKLEQDSGADEEGQEAGGSEATQGSETSDDGQASAEQEGADSSSPQPGPSNGVTPL
PRSALLIQLATARPRPVKAKPLDWRVQSKDWPHAGRPAHELRYSIYRDLWERGFFLSAAG
KFGGDFLVYPGDPLRFHAHYIAQCWSAEDPIPLQDLVSAGRLGTSVRKTLLLCSPQPDGK
VVYTSLQWASLQ
NT seq 939 nt   +upstreamnt  +downstreamnt
atgctggtggtggaggtcgctaatggccgctcgctggtatggggagccgaggcggtgcag
gcgctgcgggagcgcctgggagtcgggggacgcacggtgggcgccctgccccgcgggccc
cgccagaactcgcgcctgggccttccgcttctgctgctgcctgaagaagcccggctcctg
gcggagataggcgctgtgaccttagtcagcgccccgcgtccggatccccgcaaccatggc
ttggccctagcgtcgttcaaacgccagcaagagcagagtttccaggatcagagcactttg
gcagcagaggcccgggagacccggcgtcaggagcttctggagaagatcgtagaaggccag
gctgccaagaagcagaagctggaacaggattctggggcagatgaagaaggccaagaagcc
ggtggaagtgaagctacccaaggaagtgagaccagtgatgatggtcaggcttctgcggag
caggaaggagcagattcttcatccccccaaccaggaccttcaaatggggtgactcccttg
cccagatcagccctgcttatccagctggccactgccaggcctcggcctgtaaaagctaag
cctctggactggcgtgtgcagtccaaagactggccccatgctggccgtcctgctcatgag
cttcgctacagcatctacagagacctgtgggagagaggcttcttcctcagcgcagctggg
aagtttggtggtgacttcctggtctatcctggtgatccgctgcgtttccatgctcactac
attgctcagtgctggtctgctgaggaccccatcccacttcaggacctggtctctgcaggc
cgcctgggaaccagtgtcagaaagactctgcttctctgctcccctcagcctgatgggaag
gtggtttatacttccctgcagtgggccagcctgcagtga

DBGET integrated database retrieval system