KEGG   Rattus norvegicus (rat): 292536
Entry
292536            CDS       T01003                                 
Symbol
Prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
  KO
K12844  U4/U6 small nuclear ribonucleoprotein PRP31
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    292536 (Prpf31)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    292536 (Prpf31)
Spliceosome [BR:rno03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    292536 (Prpf31)
SSDB
Motif
Pfam: Nop Prp31_C VWA_CoxE
Other DBs
NCBI-GeneID: 292536
NCBI-ProteinID: NP_001099689
RGD: 1305832
Ensembl: ENSRNOG00000061039
UniProt: A6KS26 A0A8I6GLQ3
Position
1:complement(74491247..74502922)
AA seq 499 aa
MSLADELLADLEEAAEEEEGGSYGEEEEEPAIEDVQEETQLDLSGDSVKSIAKLWDSKMF
AEIMMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSK
RFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNATIMVVSVTASTTQGQQLS
DEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSIIIGASTAAKIMGVAGGLTN
LSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLRRKAARLVAAKCT
LAARVDSFHESTEGKVGYELKDEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYR
KMKERLGLTEIRKQANRMSFGEIEEDAYQEDLGFSLGHLGKSGSGRVRQTQVNEATKARI
SKTLQRTLQKQSVVYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQKYF
SSMAEFLKVKGEKSGTMST
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgtcgctggcagatgagctcttggctgaccttgaggaggcagcagaagaagaagaagga
ggaagctatggagaagaagaggaggagccagcaattgaggatgtacaagaggagacacaa
ctggatctttctggagattcagtcaagagcattgccaagctatgggatagcaagatgttt
gctgagatcatgatgaagattgaggagtatatcagcaagcaagccaaagcttcagaagtg
atgggaccggtggaggcagcccctgagtaccgagtcattgtggatgccaacaacctgact
gtggagatagaaaacgagctgaacattatccataagttcatccgggataaatactcaaag
agattccctgagctagaatccttggtgcccaacgctctggattacatccgcacagtcaag
gaactgggcaacagcctggataagtgtaagaacaatgagaatctccagcagatcctgacc
aatgctaccatcatggttgttagtgttactgcctctaccacccaggggcagcagctgtca
gatgaggaactagagcgactagaggaggcctgtgacatggcactggagctgaatgcctcc
aagcaccgcatctatgagtacgtggagtcccggatgtcgttcattgcacccaacttgtcc
atcatcattggagcttccacggctgccaagatcatgggtgtggctggagggctgaccaac
ctgtctaagatgcctgcctgcaacatcatgctgttgggagcccagcgcaagacactgtct
ggcttctcttctacctcagtgctgcctcacactggctacatctaccacagtgacattgtg
cagtctctgcccccagatcttcggcggaaggcagcccgcctagtggctgccaaatgtaca
ctggcagctcgtgtggacagtttccatgagagcacagaggggaaggtgggctatgaacta
aaggacgagattgagcgcaagtttgacaagtggcaggagccaccacctgtgaagcaggtg
aagcccctgcctgcaccccttgatgggcagcggaagaagcgagggggccgaaggtaccgc
aagatgaaagaacggctaggactgactgagatccggaagcaggccaaccgcatgagcttt
ggagagattgaggaggatgcctatcaagaagacctgggctttagcctgggccacttgggc
aagtcaggcagtgggcgtgtgcggcagacacaggtgaatgaggccaccaaggctaggatc
tccaagacactacagcggaccttacagaaacagagtgtggtgtatggtgggaagtcaaca
attcgtgaccgctcctcggggactgcctctagtgtggccttcactccactccagggtctg
gagattgtgaacccacaagcagccgagaagaaggtggcagaggccaatcagaagtatttc
tctagcatggccgagttcctcaaggtcaagggtgagaaaagtggcaccatgtctacttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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