KEGG   Rattus norvegicus (rat): 292640
Entry
292640            CDS       T01003                                 
Symbol
Vta1
Name
(RefSeq) vacuolar protein sorting-associated protein VTA1 homolog isoform 2
  KO
K12199  vacuolar protein sorting-associated protein VTA1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    292640 (Vta1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    292640 (Vta1)
Membrane trafficking [BR:rno04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT associated proteins
    292640 (Vta1)
SSDB
Motif
Pfam: Vta1 Vta1_C DAG_kinase_N
Other DBs
NCBI-GeneID: 292640
NCBI-ProteinID: NP_001020811
RGD: 1305031
Ensembl: ENSRNOG00000011540
Vega: OTTRNOG00000000922
UniProt: Q4KM55
Position
1:complement(10852966..10900764)
AA seq 251 aa
MTSEILWWPTTLKKQLGDNEAVTQEIVGCAHLENYALKMFLYADNEDRAGRFHKNMIKSF
YTASLLIDVITVFGELTDENVKHRKYARWKATYIHNCLKNGETPQAGPVGIEEDNDVEEN
EDVGATSLPTQPPQPSSSSTYDPSNLAAGSYSGIQIPPGAHAPANTPAEVPHSTGVTSNA
VQPSPQTVPAIPAIDPDLYTASQGDVRLTPEDFARAQKYCKYAGSALQYEDVSTAVQNLQ
KALRLLTTGRE
NT seq 756 nt   +upstreamnt  +downstreamnt
atgacaagcgagatcctgtggtggcctactactcttaagaaacagttgggggataatgaa
gctgttactcaagaaatcgttggttgtgcccatttggaaaattatgctttgaaaatgttc
ctgtacgcggacaacgaagaccgagctggacgatttcacaaaaacatgatcaagtccttc
tacactgccagccttttaatagatgtcatcacagtgtttggcgagctcacagatgaaaat
gtgaaacatagaaagtacgcaaggtggaaggcaacatatattcataactgcttaaagaat
ggggagactcctcaagcaggccctgttggaatagaggaagataacgatgttgaggaaaat
gaagatgttggtgcaacctctctgcccactcagccacctcagccatcatcatcctcaacg
tacgacccaagcaacttggcagcaggcagctacagtgggatacagatccctccgggtgca
catgctccagccaatacccctgcagaagtgccgcacagcacaggtgtaacaagtaatgct
gtccagcctagtccacagactgtcccagccattcccgccattgatcctgacctgtacaca
gcttcccagggggatgtccgcctgaccccagaggactttgctcgggctcagaagtactgc
aagtacgctggcagtgccctgcagtatgaagacgtgagcaccgcggtgcagaacctgcag
aaggccctcaggctgctgacaacgggcagggaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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