KEGG   Rattus norvegicus (rat): 29274
Entry
29274             CDS       T01003                                 
Symbol
Rnf4
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    29274 (Rnf4)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     29274 (Rnf4)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    29274 (Rnf4)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-UDP Prok-RING_4 zf-RING_4 zf-rbx1 zf-C3HC4_4 TerY_C Rtf2 zf-RING_11 zf-RING_16 TRAF3_RING DZR zf-ANAPC11 zf-RING_6 zf-RING_10 FAM216B zf-P11 zf-C3HC4_5
Other DBs
NCBI-GeneID: 29274
NCBI-ProteinID: NP_062055
RGD: 3583
Ensembl: ENSRNOG00000013930
UniProt: O88846
Structure
Position
14:complement(80625864..80647138)
AA seq 194 aa
MSTRNPQRKRRGGAVNSRQTQKRTRETTSTPEISLEAEPIELVETVGDEIVDLTCESLEP
VVVDLTHNDSVVIVEERRRPRRNGRRLRQDHADSCVVSSDDEELSKDKDVYVTTHTPRST
KDEGTTGLRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTC
RKKINHKRYHPIYI
NT seq 585 nt   +upstreamnt  +downstreamnt
atgagtacaagaaatcctcaaagaaagcggcgtggtggagctgtgaattctagacaaacc
cagaagcgaactcgggaaacaacttcaacccctgagatttccttggaagcagaacccata
gaacttgtggaaaccgttggagatgaaatcgtggacctcacctgtgaatctttagagcct
gtggttgtggacctgactcacaatgactctgttgtgattgttgaagaaaggagaaggcca
aggagaaatgggaggaggttgcgccaagaccatgctgacagctgtgtggtgagcagtgat
gatgaagaactgtctaaggacaaagatgtatacgtgactacccatactcctcgaagcacc
aaggatgaaggaactactggacttaggccctcgggcaccgtcagttgtccgatctgcatg
gatggatactctgagattgtgcagaatgggcgtctcattgtttctacagaatgtggccac
gtcttctgtagccagtgcctccgtgattcccttaagaatgctaacacttgcccaacttgt
aggaaaaagatcaaccataaacggtaccatcccatttatatatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (15)   
   RefSeq(nuc) (3)   
   GenBank (6)   
   EMBL (6)   
3D Structure (4)   
   PDB (4)   
Protein domain (23)   
   Pfam (23)   
All databases (57)   

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