KEGG   Rattus norvegicus (rat): 292778
Entry
292778            CDS       T01003                                 
Symbol
Polr2i
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03020  RNA polymerase
rno03420  Nucleotide excision repair
rno05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    292778 (Polr2i)
  09124 Replication and repair
   03420 Nucleotide excision repair
    292778 (Polr2i)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    292778 (Polr2i)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    292778 (Polr2i)
   03400 DNA repair and recombination proteins [BR:rno03400]
    292778 (Polr2i)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     292778 (Polr2i)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      292778 (Polr2i)
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Zn_ribbon_recom Ogr_Delta DZR
Other DBs
NCBI-GeneID: 292778
NCBI-ProteinID: NP_001099714
RGD: 1309395
Ensembl: ENSRNOG00000020799
UniProt: D4A531 A6J9V4
Position
1:94610976..94612413
AA seq 125 aa
MEPDGTYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITH
EVDELTQIIADVSQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCG
HRWTE
NT seq 378 nt   +upstreamnt  +downstreamnt
atggaacctgacgggacgtacgagcctggcttcgtcggtattcggttctgccaggaatgt
aataacatgctgtaccccaaggaggacaaggagaatcgcattctgctgtacgcgtgccgg
aattgcgattaccagcaggaagccgacaacagctgcatctacgtcaacaaaatcacgcac
gaagtggacgagctgacccagatcatcgcagacgtgtcccaggaccctacgttgccccgg
accgaggaccacccgtgccagaagtgtggccacaaggaggcagtgttcttccagtcacac
agtgcccgagctgaggatgccatgcgcctgtactatgtatgcaccgccccacactgcggc
caccgctggactgagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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