KEGG   Rattus norvegicus (rat): 292886
Entry
292886            CDS       T01003                                 
Symbol
Tbc1d17
Name
(RefSeq) TBC1 domain family member 17
  KO
K19945  TBC1 domain family member 17
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04137  Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    292886 (Tbc1d17)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    292886 (Tbc1d17)
Membrane trafficking [BR:rno04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    292886 (Tbc1d17)
SSDB
Motif
Pfam: RabGAP-TBC PH_RBD
Other DBs
NCBI-GeneID: 292886
NCBI-ProteinID: NP_001099728
RGD: 1309686
Ensembl: ENSRNOG00000020191
UniProt: A6JAS9 A0A8I6ARY2
Position
1:complement(104461266..104469615)
AA seq 646 aa
MEGSSYRVVFEKGGVYLHTSARKHQDPDSLIAGVLRVVEKDNDVLLHWAPVEEAGDPTQI
FFSKKDPSGGEPSTSEEEPTFDPGYEPDWAVISTVRPRPHLAEPRRGAEPSSPRSSWAFS
VSLGELKSIRRSKPGLSWAYLVLVTQAGGSLPALHFHRGGTRALLRVLSRYLLLASSPQD
SRLYLVFPQDPSALSDSFHHLQLFDQDSSNVVSRFLQDPYSTTFSSFSRVTNFFRGALQP
HPEGASSPDLPPLPDDEPEPGFEVISCVELGQRPTVERAPPVTEEEWNRHVGPEGRLQNV
PELKSRIFSGGLSPGLRREAWKFLLGYLSWESSAEEHKAHVRKKTDEYFRMKLQWKSVSA
EQERRNSLLHGYRSLIERDVSRTDRTNKFYEGPENPGLGLLNDILLTYCMYHFDLGYVQG
MSDLLSPILFVVQNEVDAFWCFCGFMELVHGNFEESQETMKRQLGQLLLLLRVLDQPLCD
FLDSQDSGSLCFCFRWLLIWFKREFPFPDVLRLWEVLWTGLPGPNLHLLVACAILDMERD
TLMLSGFGSNEILKHINELTMKLSVEDVLTRAEALYRQLTACPELPHNVQEILGLAQPEE
PSSPSPPVSPMPLSPTRAPMPPPPPEEVAPQPDSSLEILPEDEDGA
NT seq 1941 nt   +upstreamnt  +downstreamnt
atggaaggatccagctacagggtggtgtttgaaaagggaggcgtgtacctgcacaccagc
gctcggaagcaccaggatccggactcacttatcgcgggcgtcttacgagtggtggagaag
gacaacgatgtcctcctgcactgggctccggtggaggaggctggcgacccaacgcagatc
ttcttctctaagaaggacccaagtggaggtgagcccagcacctcagaggaggaacccacc
tttgacccaggctatgaacctgactgggctgtcattagcacagtgcggccacggccccac
ctggcagagcccaggagaggtgcagagcccagttccccccggagctcctgggccttctct
gtgagcctaggggagctcaagtccatccgcagatccaagccaggcctcagctgggcctac
ctggttctggtgacccaggctggaggctccctgcctgccttgcacttccacagagggggt
acccgagccctgctccgagtccttagccgctacctgctgttggccagctctccacaggac
tcccgcctctacttggtcttcccccaggacccctctgccctctctgactccttccaccat
cttcaactctttgaccaggacagctccaacgtggtgtctcgcttccttcaggatccctac
tctaccaccttcagtagcttctctcgagtgaccaacttcttccggggagccctgcagccg
caccctgagggcgcctcttcccctgatctacccccgctgccagatgatgagccagagcct
ggctttgaggtcatctcttgcgtggaactgggccagcgtcccacagtggaacgtgctcct
ccagtcacagaggaagaatggaaccgccacgtgggtcctgagggtcgcctgcaaaatgtc
cctgagttgaaaagtcggatcttctcagggggtctcagccctggccttcggcgggaggct
tggaagttccttctggggtaccttagctgggagagttcagctgaggaacacaaagcccac
gtgcggaagaaaacggatgagtacttccgaatgaagctgcagtggaagtctgtgagcgct
gagcaggagcggaggaattcactgcttcatggctaccgaagcctcattgagagagatgta
agccgcactgacaggactaacaagttctatgaagggcctgagaacccagggctgggcctg
ctcaacgacatccttcttacctactgcatgtaccacttcgacttgggctatgttcagggc
atgagtgacctcctgtccccgatcctcttcgttgttcagaatgaagtagatgccttctgg
tgtttctgtggcttcatggaacttgtgcatgggaactttgaagagagtcaggagactatg
aagcggcagcttgggcagctcctgctgcttctgcgggtgctggatcagccactctgtgat
ttcctggattctcaggactcgggctcgctgtgcttctgcttccggtggctgctcatctgg
ttcaagagggaattcccctttcctgacgtccttcggctgtgggaggtgctgtggactggg
cttcctggccccaatctgcacctgctggtggcctgtgccatcttggacatggaacgggac
accctgatgctgtctggctttggctccaacgagatccttaagcacatcaatgaactgacc
atgaagctgagcgtggaggatgtgctgacacgggcagaggctctgtacaggcagctgacg
gcctgcccagagctgccacacaacgtgcaggagatcctggggctggcacagccagaagag
cctagtagcccatctcctccggtatccccaatgcccttgtcacccactcgagccccgatg
cccccgccgccgcctgaggaagtggccccgcagcctgacagcagtctggagattctgcct
gaggatgaagatggtgcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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