KEGG   Rattus norvegicus (rat): 292889
Entry
292889            CDS       T01003                                 
Symbol
Med25
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 25 isoform 3
  KO
K15168  mediator of RNA polymerase II transcription subunit 25
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    292889 (Med25)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Mediator complex
    Other mediators
     292889 (Med25)
SSDB
Motif
Pfam: Med25_VWA Med25_SD1 Med25
Other DBs
NCBI-GeneID: 292889
NCBI-ProteinID: NP_001163897
RGD: 1305137
Ensembl: ENSRNOG00000020363
Position
1:complement(104496447..104513061)
AA seq 746 aa
MVPGSEGPARAGGLVADVVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGGD
YGGTQYSLVVFNTVDCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLST
ALQLFDDFKKMREQIGQTHRVCLLICNSPPYLLPAVESTTYSGCTTESLVQKIGERGIHF
SIVSPRKLPALRLLFEKAAPPALLEPLQPPADVSQDPRHMVLVRGLVLPVGGSSAPGPLQ
PKQAVPLPPAPTSAATLSAAPQQTLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLG
PRFSPINPLQQAASGVGPPFSQAPAPPLAPGPPGAPKPPPASQPSLVSTVAPGPGLAAPA
QPGAPSMQAGTVTPGGVSGPSPAQLGGPALGGQQSVSNKLLAWSGVLEWQEKPKPASVDA
NTKLTRSLPCQVYVNHGENLKTEQWPQKLIMQLIPQQLLTTLGPLFRNSRMVQFHFTNKD
LESLKGLYRIMGNGFAGCVHFPHTAPCEVRVLMLLYSSKKKIFMGLIPYDQSGFVNGIRQ
VITNHKQVQQQKLEQQRGMGAQQAPPGLGPILEDQARPPQNLLQLRAPQPQPQGAVGASA
ATGQPQPQGTTQAPTGAPQGPPGAAPGPPPSGPILRPQNPGANPQLRSLLLNPAPPQTGV
PPPQASLHHLQPPGAPALLPPHQSLGQPQLGPQLLHPPPTQSWPTQLPQRAPLPGQMLLS
GGPRGPVPQPGLQPSVMEDDILMDLI
NT seq 2241 nt   +upstreamnt  +downstreamnt
atggtccccggatccgaaggcccggcccgggccgggggcctggtcgctgatgtggtgttt
gtgatcgaggggacggcaaacctggggccgtacttcgagggactccgcaagcactacctg
ctgcccgccatagagtacttcaacggaggaccacccgcagagacggactttgggggagac
tatggcggaacccagtacagccttgtggtgttcaacacagtagactgcgctccagagtcc
tatgtacaatgccatgctcctaccagcagtgcctatgagtttgtcacctggctcgatggc
atcaagttcatgggtggtggtggcgagagctgcagtctcattgctgaaggtctgagcact
gctctgcagctgtttgatgacttcaagaagatgcgtgaacagatcggccagacccaccga
gtctgtctcctcatctgcaactcccccccatacctactgcctgccgtggagagcaccaca
tactcaggctgtacgacggagagcctggtgcagaagataggagagcgtggtatccacttc
tccatcgtttctccaagaaagctgccagcacttaggcttctgtttgagaaggcggctcct
cctgccctactggagccattgcagcccccagcagacgtcagccaggaccccaggcacatg
gtacttgtgcgtgggctcgtgctgcctgttggcggcagctcagccccaggccctctgcag
cccaagcaagccgttcccctgccaccagctccaacttcagctgccacgctctcagcagcc
ccccagcagaccctgcccccggtcccaccacagtaccaggtccctgggaacctaagtgct
gctcaggtggctgcgcagaatgctgtggaggctgccaagaaccagaaggccgggctgggc
ccacgcttctcacccatcaaccctctccagcaagctgcttcaggagtggggccccccttc
agccaggccccggcacccccattagctcctgggccccctggagctcccaagccacctcct
gcctcacagcctagcctagtctccactgtggcccctggaccaggcctggcagccccggct
cagcctggggctccgtctatgcaggcaggcactgtgaccccaggtggggtcagtggtcct
tcaccagcccagctggggggtcctgcacttggtgggcaacagtcagtatccaacaagctc
ctagcctggagtggcgtccttgagtggcaggagaaacccaagcctgcatccgtggatgcc
aacaccaagctgacaaggtctctgccttgtcaggtctatgtgaaccatggagaaaacctg
aagactgagcaatggccccagaaactgatcatgcagctcatccctcagcaactgctgacc
accctgggcccgctgttccggaactcgagaatggtccagttccacttcaccaacaaggac
ctggagtccctcaaaggcctctaccgcatcatgggcaatggctttgccggctgcgtgcac
ttcccacatacagccccgtgcgaggtgcgcgtgctcatgctcctgtactcgtctaagaag
aagatcttcatgggcctcatcccctacgaccagagtggcttcgtcaatggcatccgccag
gtcatcaccaaccataagcaggtccagcagcagaagctagagcagcagcgtgggatgggg
gcacagcaggcacctccaggcctgggccccattctggaggaccaagcgaggcccccgcag
aatctattacagctccgtgcaccacagcctcagcctcagggtgctgtgggagcttctgcg
gctacagggcagccccagccccaaggtactacccaggccccaacaggggcaccccaaggt
cctcctggagcagcccctggcccacctccttctggacccatccttcgaccccagaaccct
ggagccaacccccagctgcggagccttctccttaatccagcaccgccccagactggggta
cccccaccccaggcctccctacaccacctccagcctccaggggcccctgcattgctgccg
ccacatcagagcctggggcagccgcagctagggccgcaactcctgcaccctccacctacc
cagtcttggcccacacagctaccccagagggcgccactgccaggtcagatgctgctgagc
gggggtccccggggcccggttccccagccgggcctgcagcccagcgtcatggaggacgac
atcctcatggacctcatctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (15)   
   RefSeq(pep) (15)   
DNA sequence (17)   
   RefSeq(nuc) (17)   
Protein domain (3)   
   Pfam (3)   
All databases (44)   

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