KEGG   Rattus norvegicus (rat): 293294
Entry
293294            CDS       T01003                                 
Symbol
Trim6
Name
(RefSeq) tripartite motif-containing protein 6
  KO
K11999  tripartite motif-containing protein 6/22/34
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    293294 (Trim6)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    293294 (Trim6)
SSDB
Motif
Pfam: SPRY zf-RING_UBOX zf-B_box zf-C3HC4_4 zf-C3HC4 zf-C3HC4_2 PRY zf-RING_2 zf-RING_5 zf-C3HC4_3 zf-RING_10 FAM76 U-box zf-Nse TRAF3_RING zf-RING_6 Fib_alpha DUF6871 Sina_RING Phasin
Other DBs
NCBI-GeneID: 293294
NCBI-ProteinID: NP_001163932
RGD: 1310896
Ensembl: ENSRNOG00000017147
UniProt: D4A3L4
Position
1:168095619..168108809
AA seq 488 aa
MTSAVLVDIRDEVTCPICLELLTEPLSIDCGHSFCQACIIGNSDNSVLNPEGKSSCPVCR
TVYQPGSLRPNRHLAAIVKRLREVVLGPGKQLEVIFCALHGEKLQLFCKEDGKLICWLCE
RSLEHRGHHTFLMEEVAQEYQDMFQESLKKLRREQQEAEKLKALIQEKRESWKSQVEPER
HRIQTEFNQLRSILDREEQRELKKLEVEERKGLSVIEKAEGDLIHQSQALKDLISDLEHR
CRGSTVELLQDVGDVTKRSEFWTLKKPQALPTKLKSLFRAPDLKKMLRVFRELTDVQSYW
VDVTLNPQTANLNLVLSKNRRQVRFVGAKLSEPSSLEEHYDCSVLGSQHFSSGKYYWEVD
VTKKTAWILGVCSTPVEPMFSFSQYSSKQGAYSRYQPQSGYWVIGLQRKHEYRAYEDSSP
SLLLSMTVPPRRIGVFLDYEAGTVSFYNVTNHGLPIYTFSKYYFPTALCPYFNPCSCVVP
MTLRRPTS
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgacttcagcagtcctggtggacatccgagatgaagtcacttgccctatctgcttggag
ctcctgacagaacccctgagcatagattgcggtcatagcttctgccaggcctgcatcata
ggaaacagtgataattcagtgctcaacccagaagggaagagcagctgtcctgtgtgccgg
accgtctaccagcctgggagcctccgtcctaaccggcacctggccgccatagtgaaaagg
ctcagagaagtcgtgttaggccctggaaaacagctcgaggtcattttttgtgcgcttcat
ggagagaaacttcaacttttttgcaaggaggatgggaagttaatttgctggctttgtgag
cgatctctggagcaccgtggtcatcacacattcctcatggaggaggtagcacaggagtac
caggacatgttccaggagtctctgaagaagctgaggagggagcagcaggaagccgagaag
ctaaaagctcttatccaagagaagagggaatcctggaagagtcaggtggagcctgagaga
caccggatccagacagagtttaatcagctccgaagcatcctggacagggaggagcagcgg
gaactgaagaaactggaagtggaagagaggaaggggctgagcgtcatagaaaaggccgag
ggtgacctgatccaccagagccaggcactaaaagacctcatctcagacctggagcaccgg
tgccgggggtccacagtggaactgttgcaggatgtgggtgacgtcacaaaaaggagtgag
ttctggaccttgaagaagccccaagctctccccaccaagctgaaaagtttgtttcgagcc
ccggatctgaagaagatgctgcgagtctttagagagctgacagacgtccaaagctactgg
gtggacgtgactctgaatccacagacggctaatttaaatcttgtcctgtcgaaaaaccgg
agacaggtgaggtttgtgggtgccaagctgtcggagccgtctagtctggaagaacattat
gactgtagtgtcctgggttctcagcacttctcctcaggcaaatactactgggaagtggat
gtgaccaagaagacggcgtggatcttgggtgtatgcagtacccctgtggaacccatgttc
tccttcagccagtactccagtaagcagggtgcctactctcggtatcagccacagagtgga
tactgggtgataggtttgcagcgtaagcacgagtacagagcctatgaggactcctcccca
tccctgctcctctccatgacggtgccacctcgacgcataggggttttcttagactatgag
gctggcacggtctccttttataatgtcacaaaccatggcttgcccatctacaccttctcc
aagtattacttccctactgccctttgtccgtattttaatccctgcagctgtgtagtcccg
atgactctgcggcgcccaacttcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (20)   
   Pfam (20)   
All databases (36)   

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