KEGG   Rattus norvegicus (rat): 293481
Entry
293481            CDS       T01003                                 
Symbol
Tufm
Name
(RefSeq) elongation factor Tu, mitochondrial precursor
  KO
K02358  elongation factor Tu
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:rno03012]
    293481 (Tufm)
   03029 Mitochondrial biogenesis [BR:rno03029]
    293481 (Tufm)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    293481 (Tufm)
Translation factors [BR:rno03012]
 Eukaryotic type
  Elongation factors
   293481 (Tufm)
 Prokaryotic type
   293481 (Tufm)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial translation factors
    293481 (Tufm)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   293481 (Tufm)
  Exosomal proteins of breast cancer cells
   293481 (Tufm)
  Exosomal proteins of colorectal cancer cells
   293481 (Tufm)
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 RsgA_GTPase DO-GTPase2
Other DBs
NCBI-GeneID: 293481
NCBI-ProteinID: NP_001099765
RGD: 1305501
Ensembl: ENSRNOG00000018604
UniProt: P85834 A6I973
Position
1:190504373..190507980
AA seq 452 aa
MAAATLLRATPRFSGLCASPTPFLQGRLRPLKAPASPFLCRGLAVEAKKTYVRDKPHVNV
GTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAAR
HYAHTDCPGHADYVKNMITGTAPLDGCILVVAANDGPMPQTREHLLLAKQIGVEHVVVYV
NKADAVQDSEMVELVELEIRELLTEFGYKGEETPVIVGSALCALEQRDPELGVKSVQKLL
DAVDTYIPVPTRDLEKPFLLPVESVYSIPGRGTVVTGTLERGILKKGDECELLGHNKNIR
TVVTGIEMFHKSLERAEAGDNLGALVRGLKREDLRRGLVMVKPGSIQPHQKVEAQVYILS
KEEGGRHKPFVSHFMPVMFSLTWDMACRVILPPGKELAMPGEDLKLSLILRQPMILEKGQ
RFTLRDGNKTIGTGLVTDVPAMTEEDKNIKWS
NT seq 1359 nt   +upstreamnt  +downstreamnt
atggcggcagcgactctattacgagcgacgccccgtttcagcggtctctgcgccagccca
accccatttctgcaaggtcggctgcggccgctgaaggccccggcatcgcccttcttgtgt
cgcggcctagcagtggaggccaagaagacttacgtacgcgacaaaccccatgtgaatgtg
ggtaccatcgggcatgtggaccatggcaagaccaccctgaccgcagccatcacgaaaatt
ctagccgagggaggtggagctaagttcaagaagtacgaggagatagacaatgccccagag
gagcgagctcggggtatcaccatcaatgcagctcatgtggagtatagcactgctgcccga
cactatgcccacacagactgccctggtcatgcagattatgttaagaatatgatcacaggc
accgcccctctggatggctgcatcctggtggtggcagctaatgatggccccatgccccag
acccgagagcacttactgctagctaagcagattggggtagagcatgttgtggtgtatgtg
aacaaggcagatgctgtccaggactcggagatggtggagctggtagagctggagatccgg
gagctgctcactgagtttggctataaaggagaggaaaccccagtcatcgtaggctcggcc
ctctgtgctcttgagcaacgtgatcctgagctaggtgtgaagtcagtgcagaagcttctg
gatgctgtggacacttacatcccagtacccacccgggacctggagaagccctttctgctc
cctgtagagtcagtttactctattcctggccgcggcacagtggtgacaggtacactagaa
cgtggcattttgaagaaaggagatgagtgtgagttgctgggacataacaagaacattcgc
actgtggtgacaggcattgagatgttccacaagagcctggagagggctgaggcaggggat
aaccttggtgctctggtccgaggcttaaagcgagaggatttgaggcgtggtttggtcatg
gtcaagccaggatccatccaaccccaccagaaggtggaggcccaggtttatatcctcagc
aaggaggagggtggccgccacaaaccctttgtatctcatttcatgcccgtcatgttctcc
ctgacctgggacatggcctgtcgagtcatcttgcctccagggaaggaacttgccatgcct
ggagaggacttgaagcttagcctaatcttgcggcagcccatgatcttagagaaaggccaa
cgtttcactttgagggatggcaacaagaccattggcacaggccttgtcactgatgtacca
gccatgaccgaggaggacaagaacatcaaatggagctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

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