KEGG   Rattus norvegicus (rat): 293489
Entry
293489            CDS       T01003                                 
Symbol
Slx1b
Name
(RefSeq) structure-specific endonuclease subunit SLX1
  KO
K15078  structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    293489 (Slx1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    293489 (Slx1b)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     293489 (Slx1b)
SSDB
Motif
Pfam: SLX1_C GIY-YIG FANCL_C T5orf172
Other DBs
NCBI-GeneID: 293489
NCBI-ProteinID: NP_001009292
RGD: 1311568
Ensembl: ENSRNOG00000019369
UniProt: Q5PQP5 A6I9A8
Position
1:complement(190716759..190722307)
AA seq 271 aa
MGHAARPGRFFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPW
DMVLILHGFPSAVAALRFEWAWQHPQASRRLTHVGPRLRSEASFTFHLRVLAHMLRVPPW
VRLPLTVRWLRPDFRHELCPAPPPHMPIAFGPPPPQPLVPKRPAASEADSERRLDLGAKA
SCTLCARMLQDEEGPLCCPHPGCPLRAHIICLAEEFLQEEPGQLLPLEGHCPSCKKSLLW
GNLVGQCHEDTEEEEVDLELEEEHWTDLLET
NT seq 816 nt   +upstreamnt  +downstreamnt
atgggacatgcagcaagaccggggcgcttcttcggagtctacctgctctactgtcagaac
cctcggcatcggggccgtgtttacgtgggattcactgtcaatcctgctcgtcgggtccgg
caacacaacgcgggtcgcaaaaaaggtggcgcctggcggaccagcgggcgaggaccctgg
gacatggtgctgattctacacgggttcccgtctgctgtggccgcccttcggtttgaatgg
gcctggcagcatcctcaagcttcgcgacgtctgactcacgtggggccgcgcctgcgcagc
gaggcttcctttaccttccacctgcgcgtgctggcgcacatgcttcgagttcctccgtgg
gtgcgcctccctctaacagtgcggtggctgcgacctgatttccgccatgaactctgtcca
gctccaccaccacacatgcccattgcctttggaccgccaccaccccagcccttggtccca
aaacgacccgctgcaagtgaggctgacagtgagcgacggctggatctaggtgccaaggcc
agctgcactctatgtgcgcgtatgctgcaggatgaagagggccccttgtgttgcccccat
cctggttgtcccctaagggcccatatcatctgcttggcagaggagttcctgcaggaagag
cctgggcagcttctgcccctagagggccattgtcctagctgcaagaagtcactactttgg
ggaaacctggttgggcagtgccacgaggacaccgaggaggaagaggtggatttggaatta
gaggaggaacactggacagacttgctggagacttga

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