KEGG   Rattus norvegicus (rat): 293624
Entry
293624            CDS       T01003                                 
Symbol
Irf7
Name
(RefSeq) interferon regulatory factor 7
  KO
K09447  interferon regulatory factor 7
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04620  Toll-like receptor signaling pathway
rno04621  NOD-like receptor signaling pathway
rno04622  RIG-I-like receptor signaling pathway
rno04623  Cytosolic DNA-sensing pathway
rno05160  Hepatitis C
rno05161  Hepatitis B
rno05162  Measles
rno05164  Influenza A
rno05167  Kaposi sarcoma-associated herpesvirus infection
rno05168  Herpes simplex virus 1 infection
rno05169  Epstein-Barr virus infection
rno05203  Viral carcinogenesis
rno05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    293624 (Irf7)
   04621 NOD-like receptor signaling pathway
    293624 (Irf7)
   04622 RIG-I-like receptor signaling pathway
    293624 (Irf7)
   04623 Cytosolic DNA-sensing pathway
    293624 (Irf7)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    293624 (Irf7)
  09172 Infectious disease: viral
   05161 Hepatitis B
    293624 (Irf7)
   05160 Hepatitis C
    293624 (Irf7)
   05164 Influenza A
    293624 (Irf7)
   05162 Measles
    293624 (Irf7)
   05168 Herpes simplex virus 1 infection
    293624 (Irf7)
   05167 Kaposi sarcoma-associated herpesvirus infection
    293624 (Irf7)
   05169 Epstein-Barr virus infection
    293624 (Irf7)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    293624 (Irf7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    293624 (Irf7)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    293624 (Irf7)
SSDB
Motif
Pfam: IRF-3 IRF MH2
Other DBs
NCBI-GeneID: 293624
NCBI-ProteinID: NP_001028863
RGD: 1307828
Ensembl: ENSRNOG00000017414
UniProt: Q3SWU2
Position
1:complement(205796956..205800543)
AA seq 455 aa
MAEVRGVQRVLFGDWLLGEVSSGRYEGLQWLNEAHTVFRVPWKHFSRRDLDEADAQIFKA
WAVARGRWPPSGVNLPPPEAEAAERRGWKTNFRCALRSTGRFILRQDNSGDPADPHKVYE
LSPELGSTTGPALENREEVTLSSALPTQGMSLGSFLARGNAGLQTPSPLLSGDAGDLLLQ
VLQYSHLLDSESRADSVPPQASGQEQEHLPEEPHAAWQMEATSSPRLQHPVLMTERNLGS
LDVTIMYKGRTVLQAMVGHPRCVFLYSPVGSAIRTSEPQPVIFPSPAELPDQKQLHYTET
LLQHVSPGLQLELRGPSLWALRMGKCKVYWEVGSPMGSTNPSTPAQLLERNCHTPIFDFS
TFFRELEEFRARRRQGSPHYTIYLGFGQDLSAGRPKEKSLILVKLEPWLCKTHLEGVQRE
GVSSLDSSSLGLCLSSTNSLYDDIEHFLMDLGQWA
NT seq 1368 nt   +upstreamnt  +downstreamnt
atggccgaagtgaggggggtccagcgagtgctgttcggagactggctcttgggtgaggtc
agtagtggccggtacgaggggctgcagtggctgaatgaggctcacacagtcttccgtgtg
ccctggaagcatttcagccgtagggatctggatgaagctgatgcacagatcttcaaggcc
tgggctgtggcccgagggaggtggccacctagtggagttaacttaccacccccagaggct
gaggctgctgagcgaagaggctggaagaccaacttccgatgtgcactccgcagcacaggg
cgctttatcttgcgtcaagacaactcaggggaccctgctgatccgcacaaggtgtatgaa
cttagcccggagcttggatctacaactggcccagctctggagaacagggaagaagtgacc
ctcagcagtgccctacccacacagggtatgtccctaggatcattcctggcaagaggaaat
gctgggttgcaaaccccaagccctctgctttctggtgatgctggggacctcttgcttcag
gttctgcaatacagccacctactggactctgagtctagggcggactcagtcccaccacag
gcttctggccaggagcaagaacaccttcctgaggagccccatgcagcatggcagatggaa
gctacctccagccccaggcttcaacacccagttctgatgactgagcgcaaccttgggtcc
ctggatgtgaccatcatgtacaagggccgcacagtgctacaggcaatggtggggcacccc
agatgcgtgttcctgtatagccccgtgggctcagcaataagaacttcagagccccagccg
gtgatttttccgagccccgctgagctcccagatcagaagcagctgcactacacagagact
ctcctacagcatgtgtctccaggccttcagctggagcttcgggggccatcactatgggcc
ctgcgaatgggcaagtgcaaggtgtactgggaggtgggcagccctatgggctccaccaac
ccctccaccccagcccagctgctggagcgcaactgccatactcccatctttgacttcagc
actttcttccgagaactggaggagttccgggcccggaggcgacaaggatcaccacattac
accatctacctgggttttgggcaagacttgtcagcagggaggcccaaggagaagagcctg
atcctggtgaagctggagccatggctgtgcaagacacatctggaaggcgtgcagcgtgag
ggtgtgtcctctctggacagcagcagtcttggcctgtgcttgtctagcaccaatagtctc
tacgatgacattgaacacttcctcatggacctgggtcagtgggcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (13)   
   KEGG PATHWAY (13)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (9)   
   RefSeq(nuc) (3)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (38)   

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