KEGG   Rattus norvegicus (rat): 29364
Entry
29364             CDS       T01003                                 
Symbol
Cd47
Name
(RefSeq) leukocyte surface antigen CD47 precursor
  KO
K06266  CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04148  Efferocytosis
rno04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    29364 (Cd47)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    29364 (Cd47)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    29364 (Cd47)
   04090 CD molecules [BR:rno04090]
    29364 (Cd47)
Cell adhesion molecules [BR:rno04515]
 Immunoglobulin superfamily
  CD47
   29364 (Cd47)
CD molecules [BR:rno04090]
 Proteins
  29364 (Cd47)
SSDB
Motif
Pfam: CD47 V-set_CD47 Mpo1-like GPR_Gpa2_C
Other DBs
NCBI-GeneID: 29364
NCBI-ProteinID: NP_062068
RGD: 2308
Ensembl: ENSRNOG00000001964
UniProt: P97829 A6IQT9
Position
11:complement(64374816..64438763)
AA seq 303 aa
MWPLAAALLLGSCCCGSAQLLLSKVKSVEFTSCNDTVVIPCKVLNVEAQSTDEMFVKWKL
NKSYIFIYDGNKNSTTREQNFTSAKISVSDLLKGIASLTMDTHEAVVGNYTCEVTELSRE
GKTVIELKNRPVSWFSTNEKILIVIFPILAILLFWGKFGILTLKYKSSHTNKRIILLLVA
GLALTLIVVVGAILFIPGEKPVKNASGLGLIVISTGILILLQYNVFMTAFGMTSFTIAIL
ITQVLGYVLAVVGMCLCIMACEPVHGPLLISGLGIIALAELLGLVYMKFVASNQRTIQPP
RNN
NT seq 912 nt   +upstreamnt  +downstreamnt
atgtggcccttggcggcggcgctgttgctgggctcctgctgctgcggttcagctcaactc
ctgcttagtaaagtcaaatctgtagagttcacgtcatgcaatgacactgtggtcatccct
tgcaaagtccttaatgtggaagcccaaagcaccgatgaaatgtttgtgaagtggaagttg
aacaaatcgtatattttcatctatgatggaaataaaaatagcactactagagaacaaaac
tttaccagtgcaaaaatctcggtctcagacttgctcaaaggcattgcctctttgacaatg
gatacccatgaggctgtggtgggaaactacacctgtgaagtgactgagctttccagagaa
ggcaaaacagttatagagctgaaaaaccgcccagtttcgtggttttctacaaatgaaaag
atcctcattgttattttcccaattttggctatactcctgttctggggaaagtttggtata
ttaacactcaaatacaagtccagccatacgaataagagaatcattctgctgctggttgcc
gggctggcgctcacactcatcgtggttgttggcgccatccttttcatcccgggagagaag
cccgtgaagaacgcttctggtcttggcctcattgtaatctccacaggaatattaatactg
cttcagtacaatgtgtttatgacagcttttggaatgacctctttcaccattgccatattg
atcactcaagtgctgggctatgtccttgctgtggtcgggatgtgtctctgcatcatggct
tgtgaaccagtgcacggcccccttttgatttcaggtttgggaatcatagctctagcagaa
ttacttggactagtttatatgaagtttgtcgcttccaaccagcggactatacaacctcct
aggaataactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (11)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (32)   
   RefSeq(nuc) (10)   
   GenBank (11)   
   EMBL (11)   
Protein domain (4)   
   Pfam (4)   
All databases (59)   

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