KEGG   Rattus norvegicus (rat): 293645
Entry
293645            CDS       T01003                                 
Symbol
Ppfia1
Name
(RefSeq) liprin-alpha-1
  KO
K26226  liprin-alpha
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    293645 (Ppfia1)
Membrane trafficking [BR:rno04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    293645 (Ppfia1)
SSDB
Motif
Pfam: SAM_1 SAM_2
Other DBs
NCBI-GeneID: 293645
NCBI-ProteinID: NP_001099790
RGD: 1309009
Ensembl: ENSRNOG00000020857
Vega: OTTRNOG00000002444
UniProt: D3ZZ81
Position
1:complement(209070608..209147740)
AA seq 1190 aa
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQET
LALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNN
TRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRE
RLRVALERCSLLEEELGATHKELMILKEQNSQKKALTEGMLDGNHEQENAPSTNGKRSSD
GSLSHEDLAKVLELQEVIDRQAREQSQMKERLASLSSHAAELEEDLDTARKDLIKSEEMN
TKLQREVREAMAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENEIANKDSMHRQTE
DKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAALSKAEERHGNIEERLRQMEA
QLEEKNQELQRARQREKMNEEHNKRLSDTVDKLLSESNERLQLHLKERMAALEDKNSLLR
EVENAKKQLEETQHDKDQLVLNIEALKAELEQMRLRGSSLHHGRPHLGSVPDFRFSVADG
HVDAYSTSAVLRRPQKGRLAALRDEPSKVQTLNEQDWERAQQASVLANVAQAFESDVDVS
DGEDDRDTLLSSVDLLSPSGQADAQTLAMMLQEQLDAINKEIRLIQEEKENTEQRAEEIE
SRVGSGSLDNLGRFRSMSSIPPYPASSLAGSSPPGSGRSTPRRVPHSPAREVDRLGVMTL
LPASREEVRDDKTTIKCETSPPSSPRPLRLDRLHKGALHTVSHEDIRDLRNSTGSQDGPV
SNPSSSNSSQDSLHKAPKKKGIKSSIGRLFGKKEKGRPGPLGKESPGQAGVSETENSSQD
ALGLSKLGGQAEKNRKLQKKHELLEEARRQGLPFAQWDGPTVVVWLELWVGMPAWYVAAC
RANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMSLTSPSAPPTSRTTLAYGD
MNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRGQLKMVDSFHRNSFQCGI
MCLRRLNYDRKELERKREESQNETRDVLVWSNDRVIRWILSIGLKEFANNLIESGVHGAL
LALDETFDFSALALLLQIPTQNTQARAVLEREFNNLLVTGTDRRFDEDDDKSFRRAPSWR
KKFRPKDIRGLASGSAETLPANFRVTSSMSSPSMQPKKVQMDVYPHYFYR
NT seq 3573 nt   +upstreamnt  +downstreamnt
atgatgtgcgaggtgatgccgaccattagtgaagcggaaggacccccaggaggaggtggg
agccatgggtcaggctccccttcccagccagacgctgattcgcattttgagcagctcatg
gtttccatgctggaagagcgagaccgccttctggacacactgagagagacacaagaaacg
ctggcattaacccaggggaagttgcatgaagttggtcatgaaagagattctttgcagagg
cagctcaacactgcacttccacaggagtttgctgcactcacgaaggaactcaatgtgtgt
cgggagcagcttctggagagagaggaagaaattgctgagctgaaggcagagaggaacaac
actaggctgctgttggagcacctagagtgccttgtctccaggcacgagcgctctctacgt
atgacagtggtgaagaggcaggcacagtcacctgcgggcgtgtccagtgaggtggaggtt
ctgaaagccctgaagtcactgtttgagcaccacaaagccttggatgagaaggtacgagag
cgattacgagtagctctggagagatgcagcttgttagaagaggagctaggtgccacccac
aaagagctaatgattcttaaagaacagaacagtcagaagaaagcactaacagagggaatg
cttgatgggaaccacgaacaggaaaatgcaccgagcaccaacggcaagagatcttccgat
ggctccttgagccatgaggatcttgccaaagtgctggagctgcaggaagtcatagacagg
caggctcgagagcagagccagatgaaggagcgcctggcctccctgtccagtcatgcagca
gagctggaagaggatctggacacagctagaaaagacctcatcaagtctgaagagatgaat
acgaaactgcagcgagaagtccgagaagcaatggcccagaaggaggatatggaggagaga
atcaccacccttgagaaacgctacctcgccgcacagcgtgaagccacgtctgtgcatgac
ctcaatgacaaacttgaaaatgaaattgcaaataaagactccatgcaccgacagacagag
gacaagaaccgccagttgcaagaacgtctggaattggcagagcagaagctgcagcagacc
ctgcgcaaagctgagacgctgccagaggtggaggctgagctggcccagagggtggctgca
ctctccaaggctgaggagagacatggcaacattgaagagaggctgcggcagatggaggca
cagctggaggagaagaatcaggagctgcagcgggcaagacagagagaaaagatgaatgag
gaacataataagcgcctgtctgacactgtggacaagttgctctcagaatccaatgagagg
ctgcagctgcatctgaaggagagaatggcggcgctggaggacaagaattctctgctaagg
gaagttgaaaatgcaaagaagcaactagaagagacccagcatgataaggaccaacttgtc
ttgaatattgaagccctgaaggctgagctggagcagatgagactgagaggttcttcactt
catcatggccgaccccatttgggcagtgtcccggacttcaggttctctgtggcagacggg
catgtggatgcttacagcaccagtgcagtgttgcggcgcccccagaagggccggctggca
gcgctgcgggacgagccctccaaggtgcagaccctcaatgaacaggactgggaacgggcc
caacaagccagcgtcttggcaaatgtggcacaggcatttgagagtgatgtggatgtgtct
gatggtgaagatgaccgagacactctgctcagctcagttgatctgctgtcacccagtggg
caagctgatgcccagaccctggccatgatgcttcaggaacagctggatgcgatcaacaaa
gagatcagactgatccaagaagagaaggagaatacagagcagcgggcagaggagatcgag
agcagagtgggcagtggaagcttggacaatcttggtcgttttagatcaatgagctccata
cccccctaccctgcttcctcgcttgccggctcctctcctccaggcagtggtcggtccaca
cccagaagggtccctcacagtcctgcccgggaggtggacaggctgggtgtcatgactctg
ttgccagcttccagagaagaggtacgagacgacaagacgacgataaaatgtgaaacctcc
cccccatcctccccaaggcctctgcgcttagacaggctgcacaagggtgcgctgcacacg
gtcagccatgaggacatcagggatctgaggaactccacaggctcccaggatggtcccgtg
agcaaccctagcagcagcaatagtagccaggactccctccacaaagccccaaagaagaag
ggcatcaaatcctccattggccgcttatttgggaagaaggaaaagggccggcctggtccg
ctgggcaaggagtcaccagggcaagctggtgtttcagagacagaaaattcatctcaagat
gccttgggactcagcaaactgggagggcaagctgagaaaaaccggaaacttcagaaaaag
catgagctgctggaggaggcccgcaggcaaggcttgcctttcgcacagtgggatgggcca
actgtggtggtgtggctagagctctgggttgggatgcctgcctggtatgtggctgcttgc
cgagcaaacgtcaagagtggtgccattatgtcagccctgtcagacactgagatccagcgg
gagattggcatcagcaaccccttgcacaggctgaagctgcggctggctatccaagagata
atgtcactgactagcccttctgctccacccacatctaggacgacgctagcatatggggac
atgaaccacgagtggattggcaacgagtggctgcccagcttgggcctgccgcagtaccgc
agctacttcatggagtgccttgtcgatgcccggatgctggatcacctgaccaagaaagac
cttcgagggcagctgaagatggtcgacagcttccatagaaacagtttccagtgtggaatt
atgtgcctgagaaggttgaattatgatcgaaaagaactggaaagaaaacgagaagagagt
cagaatgagacaagagatgtgcttgtttggagcaatgatcgggtgattcgctggatcctg
tcgatcggccttaaagagtttgccaacaacctaatagagagcggtgttcacggcgcactt
ctggccttggacgagacgttcgatttcagcgccctggcactcttgttacagattccaaca
cagaatacacaggctcgcgctgtcttggaaagagaattcaacaaccttttggtcaccggg
actgatcggaggtttgatgaggatgatgacaaaagcttcaggagggcaccttcctggagg
aagaagttcagaccaaaggacatccgtggcttggcttctggctctgcagagacgttgcct
gccaacttccgggtcacctcctctatgtcatctccctctatgcagccaaagaaggttcag
atggacgtttacccacactacttctacagatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (19)   
   UniProt (1)   
   RefSeq(pep) (18)   
DNA sequence (18)   
   RefSeq(nuc) (18)   
Protein domain (2)   
   Pfam (2)   
All databases (49)   

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