KEGG   Rattus norvegicus (rat): 293650
Entry
293650            CDS       T01003                                 
Symbol
Tcirg1
Name
(RefSeq) V-type proton ATPase 116 kDa subunit a 3
  KO
K02154  V-type H+-transporting ATPase subunit a
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00190  Oxidative phosphorylation
rno01100  Metabolic pathways
rno04142  Lysosome
rno04145  Phagosome
rno04721  Synaptic vesicle cycle
rno04966  Collecting duct acid secretion
rno05152  Tuberculosis
rno05165  Human papillomavirus infection
rno05323  Rheumatoid arthritis
Module
rno_M00160  V-type ATPase, eukaryotes
Brite
KEGG Orthology (KO) [BR:rno00001]
 09100 Metabolism
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    293650 (Tcirg1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    293650 (Tcirg1)
   04142 Lysosome
    293650 (Tcirg1)
 09150 Organismal Systems
  09155 Excretory system
   04966 Collecting duct acid secretion
    293650 (Tcirg1)
  09156 Nervous system
   04721 Synaptic vesicle cycle
    293650 (Tcirg1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    293650 (Tcirg1)
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    293650 (Tcirg1)
  09163 Immune disease
   05323 Rheumatoid arthritis
    293650 (Tcirg1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    293650 (Tcirg1)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   293650 (Tcirg1)
SSDB
Motif
Pfam: V_ATPase_I APG6_N DUF2730
Other DBs
NCBI-GeneID: 293650
NCBI-ProteinID: NP_954520
RGD: 735136
Ensembl: ENSRNOG00000017220
UniProt: Q2I6B0
Position
1:complement(210556270..210568021)
AA seq 834 aa
MGSMFRSEEVALVQLLLPTASAYNCVSQLGELGLVEFRDLNESVSAFQRRFVVEVRRCEE
LEKTFTFLREEVQRAGLTLTPPEGTLPAPPPRDLLRIQEETDRLAQELRDVRGNQQALRA
QLHQLQLHSAVLGQSHAPPMAAVHTEGPTTERTPLLSATPGPHADLKVNFVAGAVEPCKA
AALERLLWRACRGFLIASFKETEGQLEDPVTGEPATWMTFVISYWGEQIGQKVRKITDCF
HCHVFPYLEQEEARLRTLQQLQQQSQELQEVLGETERFLSQVLGRVQQLLPPGQVQIRKM
KAVYLTLNQCSVNTTHKCLIAEVWCATRDLPTVQQALQSGSSEEGVSAVAHRIPCQDMPP
TLIRTNRFTSSFQGIVDAYGVGRYREVNPAPYTIITFPFLFAVMFGDVGHGLLMFLFALA
MVLTENQPAVKTTQNEIWQTFFGGRYLLLLMGLFSIYTGFIYNECFSRATTIFPSGWSVA
AMANQSGWSDEYLSQHPMLTLNPNITGVFLGPYPFGIDPIWSLATNHLSFLNSFKMKMSV
ILGVTHMAFGVFLSIFNHVHFGQAHRLLLETVPELIFLLGLFGYLVFLIVYKWLYVSAAS
ASSAPSILIHFINMFLFSQNPTNRLLFHGQVVVQYALVVLALATVPILLLGTPLYLLRQH
HRRNTQRRPTAGRQDEDSDKLLASPDASTLENSWSPDEEKAGSSGDEEAEFVPSEIFMHQ
AIHTIEFCLGCISNTASYLRLWALSLAHAQLSEVLWAMVMRIGLGMGREIGVASVVLVPV
FAAFAVLTVAILLVMEGLSAFLHALRLHWVEFQNKFYSGTGYKLSPFAFTVDSD
NT seq 2505 nt   +upstreamnt  +downstreamnt
atgggctccatgttccggagtgaagaggtggccttggtccagctcctgttgcccacagca
tctgcctacaactgtgtgagccagctgggtgagctgggcctcgtggagtttagagacctc
aacgaatcggtgagtgccttccagagacgcttcgtggtagaggtccggcgctgcgaggag
ctggagaagaccttcaccttcttgcgggaagaagtgcagcgggcaggcctgacactgacc
ccacccgaggggacactgccagcaccacctccccgagacctgctgcgcatccaggaggaa
acggaccgcttggcccaggagcttcgggatgttcgaggcaaccaacaggcacttcgggcc
cagctgcaccagctacagctccactcagccgtgctgggccagagccacgcccctccgatg
gcagctgtccatacggagggacccaccactgagagaacacccctgctttcagccacccca
gggccacatgcagacctgaaggtcaattttgtggcaggtgctgtggagccttgcaaggct
gcagccctggagcgcctgctttggagagcttgccgcggcttcctcattgccagctttaag
gagactgaggggcagctggaggacccggtgacgggtgagcctgcaacttggatgaccttt
gtcatctcctactggggtgagcagatcggacagaaggttcggaagatcacagactgcttt
cactgtcatgtcttcccgtacctggagcaggaggaagcccggctcaggaccttgcagcag
ctgcagcagcagagccaggagcttcaggaggtcctgggggagacagaacggttcctgagc
caggtgttgggccgggtgcagcagctgctgcccccagggcaggtgcagatccggaagatg
aaggccgtgtacctgaccctcaaccagtgcagtgtgaacaccacacacaagtgcctcatt
gcggaggtctggtgtgccacgagggaccttcccactgtacagcaggcgctgcagagcggc
tcgagtgaggaaggagtgagtgctgtggctcaccgtatcccttgccaggacatgcctcca
actctcatcaggaccaaccgcttcacctccagcttccagggcattgtggatgcctatggt
gtgggccgatacagggaagtcaaccctgctccctacaccatcatcacattccccttcctc
tttgctgtgatgtttggcgatgtgggccacggactgctcatgtttctcttcgccctggct
atggtcctcactgagaaccaaccagctgtaaagaccacgcaaaatgagatctggcagacc
ttctttgggggtcgctacctactcctgctcatgggtctgttctccatctacacgggcttc
atctacaacgagtgcttcagccgagccaccactattttcccctcaggctggagtgtggct
gccatggccaaccagtcaggctggagtgacgagtatctgtcccagcaccccatgcttacc
ctgaaccctaacatcactggtgtcttcctcggaccttatcccttcggcattgacccgatc
tggagcctggccaccaaccacctgagcttcctcaactccttcaagatgaagatgtctgtc
atccttggggtcacacacatggcctttggggtgttcctcagcatcttcaaccatgtgcac
tttggccaggcccaccggctactgctggagaccgtgcctgagctcatcttcctgttgggc
ctctttggctaccttgttttcctcattgtctacaagtggctctacgtctcagctgccagc
gcctcctcggcccccagtatcctcattcacttcatcaatatgttcctcttctcccaaaac
cccaccaatcggctgctcttccacgggcaggtagtggtacagtatgcgctggtggtcctg
gctttggccacagttcctatcctgctgctgggcacacccttgtaccttctgcgccagcac
caccgaagaaacactcagagaaggcctacagcaggcagacaggatgaggacagtgacaag
cttctggcctccccggatgcttccaccttggagaacagctggagccctgatgaggagaag
gctgggagctcaggagatgaagaagctgagtttgtcccttcggagatcttcatgcaccaa
gccatccacaccattgagttctgcctgggctgcatctccaacacagcctcctacttgcgt
ctctgggccctgagcctggctcatgctcagctgtctgaggtcctgtgggccatggtgatg
cgcataggcctaggcatgggccgagagattggtgtggcatctgtggtgctggtccctgtg
tttgctgcctttgctgtgttgactgtggccatcttgctagtgatggaggggctctcagcc
ttcctacatgccctgcggttgcactgggtggagttccagaacaagttctattcagggacc
ggctacaagctcagccccttcgccttcactgtggacagtgactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (9)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system