KEGG   Rattus norvegicus (rat): 293698
Entry
293698            CDS       T01003                                 
Symbol
Ccdc88b
Name
(RefSeq) coiled-coil domain-containing protein 88B
  KO
K25813  coiled-coil domain-containing protein 88B
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    293698 (Ccdc88b)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule-associated proteins (MAPs)
     293698 (Ccdc88b)
SSDB
Motif
Pfam: HOOK_N TMF_TATA_bd
Other DBs
NCBI-GeneID: 293698
NCBI-ProteinID: XP_215206
RGD: 1311475
Ensembl: ENSRNOG00000024931
Vega: OTTRNOG00000002252
UniProt: D3ZTC4
Position
1:complement(213466139..213482099)
AA seq 1476 aa
MEGAKGPRLRDFLSGSLATWALGLAGLVGEAEESSGTEEEEEEEEEGPLCTERRFLKLIS
GDLLLRVLGIIAPSSRGRLQMVKGHDGPAACRIWNLYHLWGRLRDFYQEELQLLILSPPP
DLQTLGFDPFSEEAVDELEGILRLLLGASVQCEHRELFIRHIQGLSLDVQSELAAAIQEV
TQPGAGVVLALTGPESAELVAEELEMQLRNLMGTMSRLVRERDLGAQRLAEVLLEREPAH
LLLPEASANASAEGPSHHLALQLTNAKAQLRRLRQEVEEKAELLLDSQAEVQGLESEIRR
LRQETQALSGQAKRAELYREEAEALRERAGRLPRLQEELRRCRERLHAAEVFKGQLEEER
VLSGALEASKVLLEEQLEIARERSARLHETQRENLLLRTRLGEAHADLDSLRHQLEQLVE
ENVELELELQRSLEPPPGSPGETSLPGAAPSLQDEVREAEAGRLRTVEQENRTLRGQLQM
LREQLDSQRPLLEEQSKDSMLPVTNGAPAAPLALDHSPKSLACQIGGEGPGSLDLPSPAS
YSGITRLSECLQAPDSHPELDSPFQMVSQDPQTSDQTQESDPTGEAHQSLEKSGHRVSVQ
SPIVWDPPQGAEIRIDVQELGETGSREASEGESVPEAQVLKQENPECRPRSAEFILLEPL
KDQKTLEPELELSKQQTETGGHEQRPKGLVNKLVLQKPQQTSEGPPDAWSREEPIPGETL
ATAIPEEQALRDEVAQLRREVVSLEAKLQAQAQRLEARSAEAVSLSEELAQARRTEAEAH
LEVEARAREQARLREAVDAASLELEAASREREALAEALAAAGRERRQWEREGPRLRAQVE
AAEQQVQALESQVRCHLEEAEREHLEKQALREELEKAVVRGQELGDRLEHLQRELEQAAL
ERQKFLQERESQHQRYQHLEQRLEAELQAASTNKEEALMKLKARALQLEEELIQLRQYPV
DQATEVRAEPRTVETQNGRLIEVERNNATLVAEKAALQGQLQHLEGQLGSLQGRAQELLL
QSQRAQEHSSRLQAEKSMMEIQGQELHRKLGVLEEEVRVARRAQEETRGQQQALLRDHEA
LVQLQRRQETELEGLLVRHRDLKANMRALELAHRELQGRHEQLQAQRASVEAQEVALLAE
RERLMQDGHRQRGLEEELRRLQNEHDRAQMLLAEVSRERGELQGERGELRSRLARLELER
AQLEIQSQKLRESNQQLDLSACRLTTQCELLTQLRSAQEEENRQLLAEVQALSRENRELL
ERSLESRDHLHREQREYLDQLNALRREKQKLVEKIMDQYRVLEPGPLPRTKKGSWLADKV
KRLIRPRREGALHGGPRLGADGAGSTESLGGPLETELPEGREADGTGSSSPAPMRRAQSS
LCLGDENLAGGQRRRLSSRFPAGRSSASFSPGDTPRQRFRQRRPGPLGAPSSHSKGSGVE
WDGSIETLSEHEADATGEALQEQKPEKQFLTSSLSQ
NT seq 4431 nt   +upstreamnt  +downstreamnt
atggagggggccaaggggcccaggctcagagacttcctgagtgggagtctggccacctgg
gcactgggattggctgggctggtgggggaggcagaagaatcatcggggacagaggaggaa
gaggaggaggaggaggaggggcctctttgtacggagaggagattcctgaagctgatcagt
ggagacttactccttcgggtgctgggcatcattgctcccagttcccgaggacgacttcag
atggtcaaggggcatgatggtcctgcagcctgtaggatatggaacctctatcacctgtgg
gggcgactgagggatttctatcaggaggaactgcagctgctgatcctgtcaccacctcca
gaccttcagacactgggatttgaccccttctcagaagaggcagtggacgagctggaaggc
atccttcggctgttgctgggggcctcagtgcagtgtgaacatcgggagctcttcatccgt
catatccagggcctcagccttgacgtccagagcgagctggctgctgccatccaggaggtg
acccagcctggtgctggtgtggtactggctctgactggaccagaatctgcagagctggtg
gctgaggagctggagatgcagttacggaatctgatggggacgatgtccaggctggtgcga
gagcgtgatctgggggcacagcggttggctgaagtactgctagagcgggagccagcccac
ttgctgttgccagaggcttctgctaatgcttctgcggagggtccctcgcaccatttggct
ctgcagttgaccaatgccaaggcccagctgagacgcctgcggcaggaggtggaggagaag
gccgagctgctgctggactcccaggctgaggtgcagggcttggaatctgaaattcgaagg
ctccgccaggagacccaggcgctgtctggacaagccaagcgcgcagagctctaccgcgag
gaggcagaggcactgcgggagcgggccggccgcttgccacgcctgcaggaagagttgcgg
cgctgtcgcgagaggcttcacgcagcagaggtctttaagggccagctagaggaggagcga
gtgctttctggggccctggaggcctcgaaggtcctgctggaggagcagctggagattgcc
cgagaacgctcagccaggctgcacgagacccagcgggagaacctcctgttgcgtactcgg
ctgggcgaggcccatgcggacctggactctctgcggcatcagttggagcagctggtggaa
gagaatgtggaactggaactggaacttcagaggagcctggagccgcccccaggctcccct
ggggagacttccctaccgggagcagcaccctcactgcaagatgaggtgagggaagcagag
gctgggcggctaaggacagtggaacaggagaatcggacgcttcgaggccaactacaaatg
cttcgggaacagcttgacagtcagcgccctctgctggaggagcagagcaaggactccatg
ctgcctgtgactaatggggctccagcagctcccctggccctagatcacagtcccaaaagc
ctggcttgccagataggaggcgaaggcccgggatctttggacctgccttccccagcatca
tactctggaatcacaaggttatctgagtgtctccaggcacccgattcacacccggagttg
gacagtcctttccagatggtatctcaggatccccagacctcagaccaaactcaagaatca
gaccctaccggggaggcacatcagtccctggagaagtctggtcatagagtctctgtccag
agccccattgtctgggacccaccacagggtgcagagatcagaattgatgtgcaggagcta
ggagagactggcagcagggaggcttccgaaggggagtcggtaccggaggcccaggtcctg
aaacaggagaaccccgaatgcaggcccagatctgctgagttcatcctcctggagccactg
aaggatcagaagaccctggaaccggaactagaattgtccaagcaacagacagagacagga
gggcacgaacagaggcccaaggggttggtcaataaactggtccttcagaaaccacagcag
acatcagaagggcctcccgatgcctggtccagggaggagccaatcccaggggagaccctg
gccactgctatcccagaggagcaggccctcagagatgaggtagcacaactaaggagagag
gttgtaagccttgaggctaaactgcaagcccaagcccaaagactggaggcccgaagtgca
gaggctgtctctctctctgaggagctggcccaagcacgcagaacagaggctgaggcccat
ctggaggtagaggcccgggcccgggaacaggcccgtctgcgtgaagcagtagatgcagct
agcctggagctggaggctgcatcacgtgagcgggaggcactggcagaggcgctagcagca
gcgggccgggagcggaggcaatgggaacgcgaggggcccaggctgcgggctcaagttgag
gctgccgagcagcaggtgcaagctctggagagccaggtccgctgtcatctggaggaagct
gagagggagcacctggagaagcaagcccttagggaggagctagagaaggctgtggtacgg
ggccaggaattgggggatcggctggagcatctgcagcgagagctggagcaggcggcctta
gagcgccagaagttccttcaagaacgggagagccagcaccagaggtaccagcatctggag
cagcgtctggaagctgagctgcaggcagcgtctaccaataaggaggaggcattgatgaag
ctcaaggccagagccctgcagctggaggaggagctaattcagctgcgccagtaccctgtg
gaccaggcaactgaggtacgagctgagcctcggactgtggagacccagaatggacggctc
atcgaggtggagcgaaataatgccacactggtggctgagaaggcggctctgcaggggcag
ctgcagcacctggaggggcagctggggagcctgcagggacgtgcacaggagctcctgcta
cagagtcagcgggcacaggagcacagcagtcgcctgcaggctgaaaagtctatgatggag
attcagggtcaggagctgcacaggaagctgggggtgctagaagaggaggtacgggtagca
aggcgggcccaggaggagactcgtgggcagcagcaggctctgctccgtgaccacgaggcc
ttagtgcagctgcagcgaaggcaggagacggagttggagggactgttggtgcggcaccga
gatctcaaggccaatatgcgagcattggaactggcccaccgtgagctccagggcaggcac
gagcagttgcaggcccagcgggccagtgtggaagcacaagaggtggccttactggcagag
cgcgagcgcctgatgcaggacggacataggcagcgcggactggaggaggagttgcggaga
cttcagaatgagcatgacagagctcagatgctactggctgaggtgtctcgggagcgaggg
gagctccagggtgaacgtggggagctgcggagccgcctggcgaggctggaactggagcga
gcacaacttgagatccagagccagaaactgcgtgagtccaaccagcagttggacctgagc
gcctgtcggctgaccacacagtgtgagcttctgacccagcttcgcagtgcgcaggaagag
gagaacaggcagctgttagctgaggtacaggccctgagccgggagaacagagaactgctg
gagcgcagcctggagagtcgtgaccatctgcatcgagagcagcgagagtacctggaccag
cttaatgccttgcgccgtgagaagcagaagctggtggagaaaatcatggaccagtaccgt
gtgctggaacctgggcccctaccccgtaccaagaagggcagctggctggcagacaaggtg
aagaggctgattcggccccggcgggagggagccctccatggggggccacgcctgggggcc
gatggggctggcagcacggaaagcttggggggccccctggagacggagctccctgagggc
agggaggcagatgggacagggtcctcgtcaccagcacccatgcgccgtgcccagagctct
ctctgcttgggagacgagaacctggcaggtgggcagcggcgtagactcagctcccgattc
cctgccgggcgaagctctgcgtcatttagtccaggggacaccccaaggcagcggttcaga
cagcgaagaccaggccccctgggggcgcccagttcccacagcaaaggatctggtgtggaa
tgggatggctccattgagaccctctcggaacatgaagcagatgccactggagaggccctc
caggaacagaaaccagagaaacaattccttacctcttccctcagccagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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