KEGG   Rattus norvegicus (rat): 293967
Entry
293967            CDS       T01003                                 
Symbol
Smc5
Name
(RefSeq) structural maintenance of chromosomes protein 5
  KO
K22803  structural maintenance of chromosomes protein 5
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    293967 (Smc5)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    SMC5-SMC6 complex
     293967 (Smc5)
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_15 AAA_21 AAA_25 AAA_29 KH_5 FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 293967
NCBI-ProteinID: NP_001099827
RGD: 1307492
Ensembl: ENSRNOG00000030572
UniProt: D4A9F0 A6I0N5
Position
1:complement(230195894..230265677)
AA seq 1064 aa
MATPSGKAAAPNPQASKRSLPRDASSEFPSKRKNSNPTSTLPRPSGLFVEGSIVRIAMEN
FLTYDICEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRADKVGFFVKRGCSK
GLVEIELFRTSGNLIITREIDVIKNQSFWFINKKPVTQKIVEEQVAALNIQVGNLCQFLP
QDKVGEFAKLSKIELLEATEKSIGPPEMHRYHCELKNFREKEKQLETSCKEKTEYLDKMI
QRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENVRQEYEGVKLVRDRVKEEVRKLK
EGQIPMTRRIEEIERQRRTLEVRIKEKATDIKEASQKCKQRQDLIERKDRHIKELQQALT
VKQNEEQDRQKRISNTRKMIEDLQNELRTAENCENLQPQIDAITNDLRRVQEEKALCEGE
IIDKQREKEMLEKQKRSVSDHITRFDNLMNQKEDKLRQRYRDTYDAVLWLRNNRDRFKQR
VCEPIMLTVRDNKKLRVNAVIAPKISYADKAPSRSLNELKQYGFFSYLRELFDAPDPVMS
YLCCQYHIHEVPVGTERTRERIERVIQETRLKQIYTAEEKYVLKTSFYSNKVISSNTSLK
VAQFLTVTVDLEQRRHLEEQLKEINRKLEAVDSGLVALRDTNRHLELKDNELRLKKKELL
ERKTKKRQLEQKISSKLASIRLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTGLVK
ICTSLHIQKVDLILQNTTVISEKNKLEADYMASSSQLRVTEQQFIELDDNRQRLLQKCKE
LMKRARQVCNLSADQAVPQEFQTQVPTIPNGHSSSPPMAFQDLPNTLDEIDALLTEERSR
ASCFTGLNPSVVEEYTKREIEIQQLTEELKGKKVELDEYRENISQVKERWLNPLKELVEK
INEKFSNFFSSMQCAGEVDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSV
STMLYLMALQELNRCPFRVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQ
NLPYSEKMTVLFVYNGPHMLEPNRWNLKAFQRRRRRITFTQPSQ
NT seq 3195 nt   +upstreamnt  +downstreamnt
atggcgactccgagtgggaaagctgctgcccctaacccccaggcttccaagaggtctctc
ccgagagatgcttcctccgagttcccgagcaagagaaagaactcgaacccgacgtcgacg
ctgccgcggccgtccggactcttcgtggagggctcaatcgtccgcatcgccatggagaac
ttcttaacatatgacatctgtgaagtgtctcctgggccccatctgaatatgattattgga
gccaatggaacagggaagtcaagcatagtgtgtgccatttgccttggcctagcaggcaag
cctgctttcatggggcgtgcagataaggttgggtttttcgtgaagagaggatgttccaaa
ggtttggttgaaattgaactgttcaggacttctggaaatcttataatcacccgtgaaatt
gatgtgataaaaaatcagtccttttggttcatcaacaaaaaacctgtaacccagaagata
gtggaagagcaagtcgcggccttgaacatccaagtgggcaacctctgccagttcttgcct
caggacaaagttggagaatttgctaaactcagtaaaattgaactcctcgaagctactgag
aagtcaattggtcctccagagatgcacagataccactgtgaactcaagaacttcagggag
aaggagaagcagctagagacttcttgcaaagagaaaactgaatacctagacaaaatgatt
cagagaaatgaaaggtacaaacaagatgtagaaagattctatgaacgaaaacgacattta
gatttaattgagatgcttgaggcaaaaagaccatgggtggaatatgagaatgtgcgtcag
gaatatgaaggtgtgaaactagtccgtgaccgagtgaaggaagaggtcagaaaactcaaa
gaagggcagattcctatgacacggcggattgaggaaattgaaaggcagcgtcgcactttg
gaagttcgaatcaaagaaaaggcaactgatattaaggaagcgtctcagaaatgcaaacaa
aggcaggacttgattgagcggaaggacagacatattaaggaacttcagcaagcattaaca
gtcaagcagaatgaggagcaggaccggcagaagagaataagtaacacccgcaagatgata
gaagacttgcagaatgagctcaggactgcagaaaactgcgagaaccttcagcctcagatt
gatgccatcacaaatgatctaaggcgtgttcaagaggagaaggcattatgtgaaggcgag
atcattgataaacagagagaaaaggaaatgctggagaagcagaaacggagtgtgagtgat
catatcacacgttttgacaatcttatgaatcagaaggaagataagctgagacagaggtac
cgggatacgtacgatgcagtcttgtggctgagaaataacagagacaggtttaaacaaaga
gtctgtgagcccataatgctcacggttcgtgacaataagaagttgagagtaaatgctgtt
attgctcccaagatttcatatgcagacaaagcaccttcacgatctctgaatgagttaaaa
cagtatggctttttttcataccttcgagagttatttgatgcacccgatcctgtgatgagt
tacctttgctgccaatatcatattcatgaagttcctgtgggaactgaaaggacccgagaa
agaattgaacgggtaatacaagaaactcgattaaaacagatttatacagcagaagaaaag
tatgtgttaaaaacttctttctattccaataaagttatctctagtaatacatctctgaaa
gtagcccagttcctcactgtcactgtggacctagagcaaaggagacacttggaagaacag
ctaaaggaaattaatagaaagctggaagcagtggactcaggattggtagccttgcgggat
acaaacaggcatctcgagctcaaagacaatgagctaaggctgaagaagaaggagcttctt
gaaagaaaaaccaagaaaagacaactggaacagaaaattagctccaagctggcaagtata
aggctgatggaacaggatacttgcaatctggaagaggaagaacgaaaagcaagtaccaaa
ataaaagaaataaatgttcaaaaagcaaaacttgttactgaattaacgggccttgtaaag
atatgcacttctttgcatattcaaaaagttgatttgattcttcaaaatactacagtgatc
tctgagaagaacaagttagaagcagattacatggcgtcctcctcacagctgcgtgtcaca
gaacaacagtttattgaattggatgacaataggcagagattgttacagaagtgcaaggaa
cttatgaagagagctaggcaagtatgtaacctgagtgcagaccaagccgttccccaagaa
tttcagacacaagtacccaccattccaaatggacacagctcctcaccccccatggctttt
caagatctcccaaacacattggatgaaatcgatgcattattaactgaagaaagatcaaga
gcgtcctgcttcacaggactgaatccttcggtggttgaggagtacacaaaaagagaaata
gaaatacagcagttaactgaagaactaaaggggaagaaagttgaattagatgaatacagg
gaaaacatttcgcaggtgaaagaaaggtggctgaaccccttaaaagagctagtagagaaa
atcaatgagaagttcagcaacttttttagttccatgcagtgtgctggtgaagttgatctt
catacagaaaatgaggaagattatgataaatatggaatccggattagagtaaaatttcgc
agtagtactcagctgcatgaattaactcctcatcatcaaagtggcggtgaaagaagtgtt
tctaccatgctgtacttgatggcacttcaggagcttaacagatgtccattcagagtggtt
gatgaaattaatcagggtatggacccaattaatgaacggagggtgtttgaaatggttgtg
aacaccgcctgtaaagagaacacatcgcagtacttcttcatcacaccgaagcttctacag
aatctgccttattctgaaaagatgacggtattgtttgtctacaatggtcctcatatgctg
gaaccaaaccgatggaatttaaaggcttttcaaaggcggcggcgaaggatcacatttact
caaccttctcagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (33)   

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