KEGG   Rattus norvegicus (rat): 293996
Entry
293996            CDS       T01003                                 
Symbol
Pdzd7
Name
(RefSeq) PDZ domain-containing protein 7
  KO
K21882  PDZ domain-containing protein 7
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    293996 (Pdzd7)
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    293996 (Pdzd7)
Cilium and associated proteins [BR:rno03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   293996 (Pdzd7)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 PDZ domain-containing proteins
  Other PDZ domain-containing proteins
   293996 (Pdzd7)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 CoV_nucleocap
Other DBs
NCBI-GeneID: 293996
NCBI-ProteinID: NP_001099832
RGD: 1309882
Ensembl: ENSRNOG00000032946
UniProt: D4AAZ9
Position
1:complement(253837454..253856919)
AA seq 1031 aa
MARGFTVGFDPLGLGELSSASLSSLSSRGHLGSDSASTATRYLLRKQQRLLNGPSRGIRA
SSPMGRVILINSPIEANSDESDIIHAVCVEKSPSGRLGFSVRGGSEHGLGIFVSKVEEGS
SAERAGLCVGDKITEVNGLSLESTTMGSAVRLLTSSSRLHMMVRRMGRVPGIKFSKEKTT
WVDVVNRRLVVEKCSSTPSDSSSEDGVRRIVHLYTTSDDFCLGFNIRGGKEFGLGIYVSK
VDHGGLAEENGIKVGDQVLAANGVRFDDISHSQAVEVLKGQTHIMLTIKETGRYPAYKEM
VSEYCWLDRLSNGVLQQLSPASESSSSVSSYASSAPCSSGSLPSDRMDVCLGPEDPTSQG
PGWGRADTAMQTEPDMGGSRVETWCSVRPTVILRDTAIRSDGPSSTRHLDSALSESPKTA
LLLALSRPRPPITRSQSHLTLWEEKKQRKKEKSGSSGEKGALQRSKTLMNLFFKGGRQGR
PAGDGHREAWTLDSRSPTKVRPRLDLEKAGSVGPVQKFVTWRLRRDRERGRALLSARSGS
PSGQGPNVDEQMQAWESRRPLIQDLARRLLTDDEVLAVTRHCSRYVHEGGVEDLVRPLLA
ILDRPAKLLLLRDIRSVVAPTDLGRFDSMVMPVEMEAFEALKSRAVGPSALRPTRQDTPP
KRHLITPVPDSRGGFYLLPVNSCSEDEDGEIRERLGGLKVSLGASAPHHKGIPPLQDVPV
DAFSLRRGACAPPPQPPPVAPRPPRPNWLLTEPPSREDTQQNQNQTPGQSCSRSRSHSRS
RSGSRSRSRSQGRGKSAGCRRSPSPAPITTATSANGRYHRPRKARPLLPRPLDGQVAKVG
VRQEPLENGIDQTAEDEAGNATTGELRTVTLSKMKQSLGISISGGIESKVQPMVKIEKIF
PGGAAFLCRALQAGFELVAVDGESLEQVTHQRAVDTIRRAYRNKAREPMELVVRVPGPGL
LPLSSNLRAIKGQGLAADSSSAHGPIEDTPILTQLPPTEARQLRHALSSVQKVPQSTPKL
FPIHKDPHNPS
NT seq 3096 nt   +upstreamnt  +downstreamnt
atggcgcgtggtttcacagtaggctttgacccactgggtctaggagaactcagctctgcc
tccctgagctccctctcctcccgaggccacctgggcagcgactcggcctccacagcaaca
cgatacttgctgagaaagcagcagcgcctgctgaatgggccctcccgaggaattcgagcc
tcctcacccatgggccgtgtcatcctcatcaattcccccatcgaagccaacagtgatgaa
agtgacatcatccacgcagtttgtgtggagaagagtccgtcggggaggctgggtttcagc
gtgagaggcggctctgagcatggcttgggcatctttgtcagcaaggtggaggagggaagc
agcgcagagcgggctggcctgtgtgtgggagacaagatcaccgaggtgaacgggctgagt
ctagagagcaccacaatgggcagcgctgtaagactgctgaccagcagcagccgcctgcac
atgatggtgcggcgcatgggccgtgtgcctggcatcaagttctccaaggagaagaccaca
tgggtggatgtagtgaaccggcgactggtggtagagaagtgcagttcaacaccgtcggac
agcagctcagaagacggtgtacgccgcattgtccatctctatacaacctccgatgacttc
tgcctaggcttcaacatccgaggaggcaaggagtttggcctgggcatctatgtgtccaaa
gtggaccatggtggactggctgaggagaacggcatcaaagtgggggaccaggtcctggcg
gccaacggtgtcaggttcgatgacatcagccacagccaggccgtggaggtgttgaagggc
caaacacacataatgttgaccatcaaggagaccggccgataccctgcctacaaagagatg
gtttccgagtactgctggctagatagattgagcaatggggtcctgcagcagctgtcaccg
gcctctgagagcagctccagtgtctcctcttatgcctccagcgccccctgcagctcgggc
tcgctgccctctgaccgcatggatgtttgcctgggaccagaggatcccactagccagggc
ccaggttgggggcgggcagacacagccatgcagacggaacctgatatgggcggcagccgt
gtggaaacttggtgcagcgtaaggccaaccgtcatcctcagggacacagccatccgctcc
gatggtccctcttctacccgacatcttgattctgcactttcagagtcccccaagactgct
ctgctcctggccctcagccgacccaggccccccatcacaagatcccagagccacctgaca
ctgtgggaggagaagaaacagcggaagaaggagaagtcaggatcctctggggagaagggg
gccttgcagcgctccaagacgctgatgaacctcttcttcaagggagggcggcaggggcga
ccagcaggggacgggcacagagaggcctggacactggacagcagaagccccaccaaagtc
cgtcctcgcctggacctggagaaagcagggagtgtggggcctgtgcagaagtttgtcacc
tggagactcagacgagaccgggagaggggccgggctctgctctctgccaggtctggaagc
ccctctggccaggggcccaatgtggatgagcagatgcaggcctgggaaagtcgacggccg
ctcattcaggacctggcccggaggctgctgacagacgacgaggtactagcagtcactcgc
cactgctcccggtacgtccatgagggtggtgtggaggacctagtgcgccccctgctggcc
atcctggacaggcccgcgaagctgctgctgctgagggacatcaggagcgtggtggccccc
acagaccttggccgctttgacagcatggtgatgcctgtggagatggaagcttttgaggct
cttaagagcagggcagtggggccttctgctttgagacctaccaggcaagacacgccaccc
aagcgtcatctcatcacccctgttcctgatagccgtggaggtttttacttgctgccagtg
aacagctgctcagaggatgaagatggagaaataagggagaggcttgggggccttaaggtt
tccctcggtgcctctgcccctcaccacaagggaatccctcctctacaagacgtgccagtg
gatgccttttctcttcgccgaggcgcatgcgcacctcctccccagccacctcctgtggct
ccccggcctcccaggcctaactggctactgacagaacccccaagcagagaggacactcag
cagaaccagaaccagaccccaggccaaagctgcagccgcagtcgcagtcacagccgcagt
cgcagcggcagccgcagccgcagtcgcagccaaggtcgaggcaagtctgctggatgcagg
cgctccccttccccggcacccatcaccactgccacctcagccaacgggcgttaccacagg
cctcgaaaggcaaggcccctgcttccacgacccctagatgggcaggtggccaaagtggga
gtcaggcaagagcccttggagaatgggattgatcagacagctgaggacgaagctgggaat
gccaccactggagagctgaggaccgtcacactatccaagatgaagcagtctttgggcatc
agcatctcagggggcatcgagtccaaggtgcagcccatggtgaagatagagaagatcttt
cctggaggtgctgctttcctctgcagggctctgcaggctggctttgagctggtggcagtg
gatggagaaagcctggagcaggtaacccaccagagagccgtggacaccatccgcagggcc
taccgaaacaaggctcgggaacctatggaacttgttgtcagggtccctgggcctggcctc
ctgcccctatcctctaacctacgagccattaagggccagggccttgctgccgacagttct
tccgcccatggacccattgaagatactccgattctcacacaactacctcccacggaggct
aggcaactacggcatgctctcagctctgtccaaaaggtccctcaaagtacccctaaactc
ttccctatccataaggatccccacaacccttcctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (4)   
   Pfam (4)   
All databases (26)   

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