KEGG   Rattus norvegicus (rat): 294210
Entry
294210            CDS       T01003                                 
Symbol
Trim10
Name
(RefSeq) tripartite motif-containing protein 10
  KO
K12002  tripartite motif-containing protein 10
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    294210 (Trim10)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    294210 (Trim10)
SSDB
Motif
Pfam: SPRY PRY zf-C3HC4_4 zf-B_box zf-RING_UBOX zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 zf-RING_2 STAT_alpha zf-RING_5 zf-rbx1 zf-Nse TRAF3_RING zf-RING_4
Other DBs
NCBI-GeneID: 294210
NCBI-ProteinID: NP_001009176
RGD: 1359438
Ensembl: ENSRNOG00000000782
Vega: OTTRNOG00000001475
UniProt: Q6MFY9 A1L1I7
Position
20:complement(1694771..1703724)
AA seq 489 aa
MASAPSVTSLADEVNCPICQGTLREPVTIDCGHNFCRGCLTRFCETPGPESEESLSCPLC
KEPFRPGSFRPNWQLANVVENIERLQLASTRGLEVEDACPEHGEKIYFFCEEDEAQLCVV
CRETGQHGAHTVRFLEDAAGPYREQIQKCLVCLRKEREEIQETQSRENKRIQVLLTQVAT
KKQQVISQFAHLSRFLERQQTVLLAQLEGLDGDILKQQEEFDSLATREICRFSTLIEELE
EKNERPARGLLTDIRSTLIRCETRKGRKPEAISPGLGQRIRDFPQQVMPLRQEMKIFLEK
LCFELDYEPALISLDPQTSHPKLLLSEDHRKAQFSYKWQNSPDTPQRFDRATCVLARCGF
TEGRHTWVVNVDLAHGGSCTIGVVKEDVRRKGEVRLRPEEGIWAVRLAWGFVSALGSFPT
RLALEEQPRKVQVSLDYEVGWVTFVNADTQEHIYTFTAFFTQKVFPFFGLWGRGSSFSLS
CQEGVVSLL
NT seq 1470 nt   +upstreamnt  +downstreamnt
atggcctcagctccttccgtgactagcctggcagatgaggtcaactgccccatctgccaa
ggcaccctaagggaaccagtcaccattgactgtggccacaatttctgtcgtggctgcctc
actcgcttctgtgagaccccaggcccagaatcggaagagtccctcagctgcccgctctgc
aaagagcccttccgtccagggagcttccggccaaactggcagctggccaatgtggtggag
aatatcgagcgccttcagctggcatccacaagaggcctggaggtggaggatgcctgtccg
gaacacggggagaaaatctacttcttctgcgaggaggatgaggcacagttgtgtgtggta
tgccgcgagactggacagcatggggctcacactgtgcgcttcctggaggacgcagcaggt
ccctacagggaacaaatacagaagtgtctcgtgtgtctaaggaaagagagagaggagatt
caggaaacccaatcaagagaaaacaaaagaatacaagtgctcctgacgcaggtagccacc
aagaagcaacaggtgatttcacagtttgctcatctgagccggttcctggagcgacagcag
actgtgctcttggcacagctggaggggttggacggggacatcctgaagcagcaggaagag
tttgattccctggccacgagggagatctgccggttcagcaccctgatcgaggagctggag
gagaagaatgagcggccagccagggggctcctgacggatatcagaagcactctaataaga
tgtgaaaccagaaagggccggaaacctgaggctatatccccaggactgggccaaaggatc
cgggacttcccccaacaggtcatgcccctgcggcaggagatgaagatatttctggaaaaa
ctctgctttgagttggactatgagccagctcttatctctctagacccccagacttcccac
cccaagctcctcctctctgaagaccatcggaaggctcagttctcctacaaatggcagaat
tcaccagatactccacaacgctttgatcgagccacctgcgttctggcccgatgtggcttt
acagaggggagacacacttgggtggtgaatgtcgacttggcccacggaggcagctgcact
ataggtgtggtcaaagaagatgtacgaagaaagggagaagtgaggctgaggccagaggag
ggaatatgggcagtgaggctggcttggggctttgtctcagctctgggttccttccccaca
aggctagccctggaggagcaaccccggaaggtgcaggtgtctcttgactatgaggtaggc
tgggtgacctttgtcaatgctgacacccaagaacatatctataccttcactgccttcttc
acgcagaaggtctttcccttttttggactctggggcagagggtccagtttttccctgagc
tgtcaggaaggtgtagtttccctcctctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (9)   
   UniProt (2)   
   RefSeq(pep) (7)   
DNA sequence (9)   
   RefSeq(nuc) (7)   
   GenBank (1)   
   EMBL (1)   
Protein domain (15)   
   Pfam (15)   
All databases (43)   

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