KEGG   Rattus norvegicus (rat): 29425
Entry
29425             CDS       T01003                                 
Symbol
Psmb5
Name
(RefSeq) proteasome subunit beta type-5
  KO
K02737  20S proteasome subunit beta 5 [EC:3.4.25.1]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03050  Proteasome
rno05010  Alzheimer disease
rno05012  Parkinson disease
rno05014  Amyotrophic lateral sclerosis
rno05016  Huntington disease
rno05017  Spinocerebellar ataxia
rno05020  Prion disease
rno05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    29425 (Psmb5)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    29425 (Psmb5)
   05012 Parkinson disease
    29425 (Psmb5)
   05014 Amyotrophic lateral sclerosis
    29425 (Psmb5)
   05016 Huntington disease
    29425 (Psmb5)
   05017 Spinocerebellar ataxia
    29425 (Psmb5)
   05020 Prion disease
    29425 (Psmb5)
   05022 Pathways of neurodegeneration - multiple diseases
    29425 (Psmb5)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rno01002]
    29425 (Psmb5)
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:rno03051]
    29425 (Psmb5)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.25  Threonine endopeptidases
    3.4.25.1  proteasome endopeptidase complex
     29425 (Psmb5)
Peptidases and inhibitors [BR:rno01002]
 Threonine peptidases
  Family T1: proteasome family
   29425 (Psmb5)
Proteasome [BR:rno03051]
 Eukaryotic proteasome
  Core particles (20S proteasome)
   beta type subunits
    29425 (Psmb5)
SSDB
Motif
Pfam: Proteasome DUF3991
Other DBs
NCBI-GeneID: 29425
NCBI-ProteinID: NP_001099197
RGD: 61879
Ensembl: ENSRNOG00000013386
UniProt: P28075 G3V7Q6
Structure
Position
15:complement(32042784..32047379)
AA seq 263 aa
MALASVLQRPMPVNQHGFFGLGGRADLLDLGPGSPGDGLSLAAPSWGVPEEPRIEMLHGT
TTLAFKFQHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLAR
QCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRI
SGTAFSVGSGSVYAFGVMDRGYSYDLQVEEAYDLARRAIYQATYRDAYSGGAVNLYHVRE
DGWIRVSSDNVADLHDKYTSSIP
NT seq 792 nt   +upstreamnt  +downstreamnt
atggcgctggccagcgtgttgcagcggccgatgccggtgaatcagcacgggttttttgga
ctcggaggtcgtgcagatctgctggacttgggtccggggagtcctggtgatgggctgagc
ctagccgcgccgagctggggtgtcccggaggagccacgaatcgaaatgcttcatggaacc
accaccctggccttcaagtttcagcatggagtcattgttgcagcggattcccgggccacc
gcaggtgcctacattgcttcccagacagtgaagaaagtgatagagatcaacccttacctt
ctgggcaccatggctgggggtgcagcggattgcagcttctgggagcggttgttggctcga
cagtgtcgaatctatgagcttcgcaacaaggaacgcatctcggtcgcggcggcctccaaa
ctgcttgccaacatggtgtatcagtacaaaggcatggggctgtccatgggcaccatgatc
tgtggctgggataagagaggcccgggcctctactatgtagacagtgaggggaacaggatc
tctggaaccgccttctcagtgggatctggctccgtgtatgcgtttggagtcatggatcga
ggctactcctatgacctacaagtggaggaggcctatgacctggcccgccgagccatctac
caagccacctacagagatgcctactccggaggagcagtcaacctctaccatgtgcgggag
gatggctggatccgtgtctccagtgacaatgtagctgacttacatgacaagtatacttca
tctatcccctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (8)   
   KEGG PATHWAY (8)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
3D Structure (5)   
   PDB (5)   
Protein domain (2)   
   Pfam (2)   
All databases (38)   

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