KEGG   Rattus norvegicus (rat): 294429
Entry
294429            CDS       T01003                                 
Symbol
Ranbp2
Name
(RefSeq) E3 SUMO-protein ligase RanBP2
  KO
K12172  E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03013  Nucleocytoplasmic transport
rno03250  Viral life cycle - HIV-1
rno05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    294429 (Ranbp2)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    294429 (Ranbp2)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    294429 (Ranbp2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    294429 (Ranbp2)
   03110 Chaperones and folding catalysts [BR:rno03110]
    294429 (Ranbp2)
   04121 Ubiquitin system [BR:rno04121]
    294429 (Ranbp2)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     294429 (Ranbp2)
Chaperones and folding catalysts [BR:rno03110]
 Protein folding catalysts
  Peptidyl prolyl isomerase
   Cyclophilin
    294429 (Ranbp2)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   294429 (Ranbp2)
SSDB
Motif
Pfam: Ran_BP1 zf-RanBP IR1-M Pro_isomerase WH1 TPR_1 TPR_2 TPR_14 TPR_16 TPR_8 TPR_11
Other DBs
NCBI-GeneID: 294429
NCBI-ProteinID: NP_001178533
RGD: 1560047
Ensembl: ENSRNOG00000000796
Position
20:26984520..27036573
AA seq 3088 aa
MRRSKAEVERYIASVQGSAPSPREKSMKGFYFAKLYYEAKEYDLAKKYISTYINVQERDP
KAHRFLGLLYEIEENTDKAVECYKRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVER
AAKLFPGSPAIYKLKEQLLDCKGEDGWNKLFDLIQSELYARPDDVHVNIRLVELYRSNKR
LKDAVAHCHEADRNMALRSSLEWNSCVVQTLKEYLESLQCLDSDKSTWRATNKDLLLAYS
NLMLLTLSTRDVQESRELLESFDSALQSVKSSVGGNDELSATFLETKGHFYMHVGSLLLK
MGQQSDIQWRALSELAALCYLIAFQVPRPKVKLIKGETGQNLLEMMAHDRLSQSGHMLLN
LSRGKQDFLKEVVESFANKSGQSALCDALFSSQSSKDRSFLGNDDIGNLDGQVPDLDDLA
RYDTGAVRAHSGSLQHLTWLGLQWNSLPTLPAIRKWLKQLFHHLPQETSRLETNAPESIC
ILDLEVFLLGVIYTSHLQLREKSNSHHTSYQPLCLPLPVCRQLCTERQKSWWDAVCTLIH
RKALPGTSAKLRLLVQREINSLRGQEKHGLQPALLVHWAQSLQKTGSSLNSFYDQREYIG
RSVHYWRKVLPLLKMIRKKNSIPEPIDPLFKHFHSVDIQVSEIGEYEEDAHITFAILDAV
NGNIEDAMTAFESIKNVVSYWNLALIFHRKAEDIENDALSPEEQEECKNYLRKTRDYLIK
ILDDSDSNISVVQKLPVPLESVKEMLNSVMQELEDYSEGGTLYKNGCFRSADSELKHSTP
SPTKYSLSPSKSYKYSPKTPPRWAEDQNSLLKMICQQVEAIKKEMQELKLNSNNSASPHR
WPAEHYRQDPVPDGYQGSQTFHGAPLTVATTGPSVYYSQSPAYNSQYLLRPAANVTPTKG
PVYGMNRLPPQQHIYAYSQQMHTPPVQSSSSCMFSQEMYGPPLRFESPATGILSPRGDDY
FNYNVQQTSTNPPLPEPGYFTKPPLVAHASRSGESKVIEFGKSNFVQPMQGEVIRPPLAT
PAHTTQPTPFKFNSNFKSNDGDFTFSSPQVVTQSPSTAYSNSESLLGLLTSDKPLQGDGY
SGLKPISAQTGGSRNTFSFGSKSTLTENMGPNQQKNFGFRRSDDMFTFHGPGKSIFTTPT
SELANKSHETDGGSAHGDEEDDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDG
ESKEWKERGIGNVKILRHKTSGKIRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVW
HALDYADELPKPEQLAIRFKTPEEAALFKCKFEEAQNILKALGTNASTAANHTLRIVKEP
ATQDNKDICKSDGGNLNFEFQIVKKEGPFWNCNSCSFKNAATATKCVSCQNTKPTNGKEL
LGSPLVENGFASKTGPENVQDRFALMTPNKEGHWDCSVCLVRNEPTVSRCIACQNTKSAN
KNGSSFAQTSFKFGQGDLSKSADSDFRSVFSKKEGQWDCSICLVRNEASSTKCVACQNPA
KQAPVSSPASFKAGTSDVSKTSKSGFDDMFAKKEGQWDCSLCSVRNEANAVKCVACQNPV
KPSSSTTVTVLPSFKFGTSEMTKPPRSGFEGMFAKKEGQWDCSLCFVRNEASASQCIACQ
NPNKQNQPTSAVSAPASSETSKSPKCGFEGLFTRKEGEWECTVCSVQNESSSLKCVSCDA
SKPTHKPIAEAPSAFTVGSKSQLNESAGSQVGTEFKSNFPEKNFKVGISEQKFKFGHVDQ
EKTPSFTFQGSSNTEFKSIKDGFSFCIPVSADGFKFGIQEKGNQEKKSEKHLENDPGFQA
HDTSGQKNGSGVVFGQTSSTFTFADLAKSTSREGFQFGKKDPNFKGFSGAGEKLFSSQSG
KVAEKANTSDLEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRF
DAEISQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAW
MWLASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEECQRLLLDIPLQTPHKLVDTGRAAK
LIQRAEEMKSGLKDFKTFLTNDQAKVTEEENTSSGADASSASDTTVKQNPDNTGPALEWD
NYDLREDALDDSVSSSSVHASPLASSPVRKNLFRFGESTTGFNFSFKSALSPSKSPAKLN
QSGTSVGTDEESDVTQEEERDGQYFEPVVPLPDLIEVSSGEENEQVVFSHRAKLYRYDKD
VGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMTLQTMKGTERVWVWT
ACDFADGERKIEHLAVRFKLQDVADSFKKIFDEAKTAQEKDCLITPHVSHLSTPRESPCG
KIAIAVLEETTRERTDLTQGDEVVDTTSEAGETSSTSETTPKAVVSPPKFVFGSESVKSI
FSSEKSKPFAFGNSSATGSLFGFSFNAPLKNSNSEISSIVQSGSEGKVDPDKGELPPNSD
IKQSSDGKVKNLIAFSKETSSTFKTPEKAREKNKPEDPPSDTDILIVYELTPTPEQKALA
EKLLLPSTFFCYKNRPGYVSEEEEDDEDFEMAVKKLNGKLYVDDSEKPLEENLADNDKEC
VIVWEKKPTVEERAKADTLKLPPTFFCGVCSDTDEDNGNGEDFQSELRKVQEAQKSQSEK
VTNTVGIEQTGETEATNPDGSKSEEPDSDTKHSSSSPVPGTMDKPVDLSTKKETDMEFPS
QGESKTVLFGFGSGTGLSFADLASSNSGDFAFGPKDKNFQWANTGAAVFGTQSTSKDGDD
EDGSDEDVVHNEDIHFEPIVSLPEVEVKSGEEDEEVLFKERAKLYRWDRDVSQWKERGIG
DIKILWHSVKNYYRILMRRDQVFKVCANHVITKAMELKPLNFSNNALVWTASDYADGEAK
IEQLAVRFKTKEITECFKKKIEECQQNIMKLQNGQVSLAAELSKETNPVVFFDVCVDGEP
LGRIIMELFSNIVPQTAENFRALCTGEKGFGFKNSIFHRVVPDFICQGGDITKYNGTGGQ
SIYGDKFDDENFDLKHTGPGLLSMANCGQNTNSSQFFITLKKAEHLDFKHVVFGFVKDGM
DTVRKIESFGSPKGSVSRRICITECGQL
NT seq 9267 nt   +upstreamnt  +downstreamnt
atgaggcgcagcaaggccgaggtggagcggtacatcgcctcggtgcagggctccgccccg
tcgccccgagagaagtcaatgaaaggattttattttgcaaagctgtactatgaagctaaa
gaatatgatcttgccaaaaaatacatttctacgtatattaatgtgcaagagagggaccct
aaagcccacagatttttgggtcttctttatgaaattgaagaaaatacagacaaagctgta
gaatgttataagcgttcagtggaattaaacccaacgcaaaaagatcttgtgttgaagatt
gcagaattgctttgtaaaaacgatgtgaccgatggaagagcaaagtactgggttgagaga
gcggccaaactgtttccaggaagccctgccatctataagttaaaggaacaacttttagac
tgtaaaggtgaagatggatggaataaactttttgacttgattcaatcagaactttatgca
agacctgatgatgttcatgtaaatattcgactagtagagctttatcgttcaaataaaaga
ttgaaggatgccgtggcccactgccatgaggcagacaggaacatggctttacgttcaagt
ttagaatggaattcatgtgttgtccagactcttaaggaatatctggaatctctgcagtgt
ttggattctgataaaagtacttggagagcaaccaataaagacttacttctagcctattcc
aaccttatgctacttacactttccaccagagatgtgcaggaaagtagagagctattggag
agttttgatagtgctcttcagtctgtgaaatcttctgtgggtggaaatgacgagctatca
gctacgttcctagaaacgaaaggacatttctacatgcatgttggctctctgcttttgaag
atggggcagcagagtgacatccagtggcgagctctttctgagctggctgcattgtgctat
ctcattgcatttcaggttccaagaccaaaggttaaattaataaaaggagaaactggacaa
aatctactggaaatgatggcccacgatcgccttagccagtcagggcacatgttgttaaac
ttaagtcgtggcaagcaagactttctgaaggaagttgtggaatcttttgctaacaaaagt
ggccagtctgctctctgtgatgctctgttttctagtcagtcatccaaggatagatctttt
cttggtaacgatgatattggaaacctggatgggcaagtaccagacctagatgacttggct
agatatgatactggagctgttcgagcacatagtggtagtcttcagcaccttacctggctt
ggcttacagtggaactcactgcctactttaccagcaattcgaaaatggttaaaacagctc
ttccaccatttgcctcaggagacatcaaggcttgaaacaaatgcacctgaatcaatatgt
attttagatcttgaagtattcttactcggagtaatatataccagtcacttacaactaagg
gagaagagtaattctcaccacacttcctatcagccattgtgtttgccacttccagtgtgc
agacagctttgtacagaaagacagaagtcctggtgggatgcagtttgtactctgattcac
agaaaggcattacctggaacctcagcaaaattgcgacttctagttcaacgtgaaataaac
agtctgagaggccaggaaaagcacggcctacaacctgctctgcttgtgcattgggcacag
agtcttcagaaaacaggcagcagtcttaattctttttatgatcaacgggaatacataggc
agaagtgttcattattggaggaaagtcttaccattgttgaagatgatcagaaagaagaat
agtattcctgaacctattgatcctctgtttaaacatttccatagtgtggatattcaggta
tctgaaattggcgaatatgaagaagatgcacacataacttttgctatattggatgctgtt
aacggaaacatagaagatgccatgactgcttttgaatctattaaaaatgtagtttcttat
tggaatcttgcactgatttttcacaggaaagcagaagatattgaaaatgatgccttgtct
cctgaagaacaagaagagtgcaaaaattatctgagaaagactagggactacctgataaag
attttagatgatagtgattcaaatatttccgtggttcagaaattgcctgtcccccttgag
tctgtaaaagagatgctgaactcagttatgcaggaacttgaagactacagtgaaggaggt
actctttataaaaatggttgctttcgaagtgctgattcagagttaaagcattcaacacca
tctcctaccaaatattctctatcaccaagtaaaagttacaagtattcgccaaaaacacca
cctcgatgggcagaagatcaaaattctttattgaaaatgatctgccagcaagtagaggcc
attaagaaagaaatgcaggaattgaagctaaatagcaacaattctgcatcccctcatcgc
tggcctgcagaacattaccgacaagacccagttcctgatgggtatcaggggtcacaaact
tttcatggggctccactaacagttgcaactactggcccttcagtatattatagtcagtca
cctgcatataattcccagtatcttctcagaccagcagctaatgtaactcccacaaagggt
ccagtttatggcatgaataggcttccacctcaacaacatatttatgcatattcacaacag
atgcacacaccaccagtgcaaagttcatcttcttgtatgttctctcaggaaatgtatggt
cctcccttgcgttttgagtctcctgcaacaggaattctatcacccaggggtgatgattac
tttaattacaatgttcagcagacaagcacaaatccacctttgccagaaccagggtatttc
acaaagcctccacttgtagctcatgcttcaagatcgggagaatcaaaggttatagaattt
ggaaaatccaattttgttcagcccatgcagggtgaagtaataaggccacctttggcaaca
ccagcacatacaacacagccaactccctttaaatttaactcaaatttcaaatcaaatgac
ggtgacttcacattttcatcaccacaggtagtgacacagtctccttcaacagcttacagt
aacagtgaaagtcttttaggtctcctgacctcagataaacctttacaaggagatggctat
agtggactaaaaccaatatcagctcaaactggtgggtctcggaatacattcagttttgga
agcaaaagtacacttacagaaaacatgggcccaaatcagcagaaaaattttggttttcgt
cgaagtgatgatatgtttacttttcacggtccaggaaagtccatatttacaacacctact
tcagaactggcaaataaaagtcatgaaacagatggaggaagtgctcatggagatgaagag
gatgatggtcctcactttgagcctgtggtacctcttcctgacaagatagaagtaaaaacg
ggtgaggaagatgaagaagaattcttttgcaatcgtgcaaagttgttccgttttgatggt
gaatccaaagaatggaaggaacgtgggataggcaatgtaaaaatactaaggcacaaaaca
tctggtaaaattcgccttctgatgagacgagagcaagtattaaagatctgtgcaaatcat
tatataagccccgatatgaaactgacaccaaatgctggctcagatagatcttttgtatgg
catgcccttgattatgcagatgaattgcccaaaccagaacagcttgcaattagattcaaa
actcctgaggaagcagcactatttaagtgtaaatttgaagaggcccagaacattttaaaa
gccttaggaacaaatgcctctacagcagcaaatcatactcttagaattgtcaaagaacct
gcaactcaggataacaaggacatttgcaaatctgatggtggaaacttgaactttgaattc
cagattgtaaagaaggaagggcctttctggaattgtaacagctgctcgtttaagaatgct
gcaactgctacgaaatgtgtatcatgccaaaatacaaaaccaacgaatggcaaagagctc
ctaggttcaccattagttgaaaatggctttgcttctaaaactggcccagaaaatgttcaa
gatcgatttgcattgatgactccaaataaagaaggtcactgggattgcagtgtttgttta
gtaagaaacgaacccactgtatctaggtgcattgcatgtcagaacacaaagtctgctaac
aaaaatgggtcttcctttgctcaaacttctttcaaatttggccagggagatctttctaag
tctgctgacagtgacttcaggtctgtgttttctaaaaaagaaggtcagtgggattgcagt
atatgcctagtccgaaatgaagcaagctctacaaaatgtgttgcttgtcagaacccagca
aaacaggctcctgtctcatcacctgcttcttttaaggctggcacttcagatgtaagtaaa
acttcaaagagtggatttgatgacatgtttgctaagaaagaaggacagtgggattgtagt
ttgtgctcagtgagaaatgaagcaaatgctgtaaagtgtgttgcttgtcagaatccagtt
aaacccagttcatctaccactgttacagtacttccctctttcaagtttggtacctcagag
atgactaagcctcccaggagtggatttgagggcatgttcgccaagaaggaaggacaatgg
gattgcagcttgtgttttgtccgaaatgaagcaagtgcttctcaatgtattgcttgtcag
aatccaaataagcagaatcagcctacatctgctgtatcagctcctgcctcttcagagaca
agcaaatctccaaagtgtggttttgaaggcttgtttaccagaaaggaaggcgagtgggag
tgtactgtttgttctgtacaaaatgagagctcttccctaaaatgtgtgtcttgtgatgcc
tccaagccaactcataagcctattgcagaagctccttcagctttcacagtgggctcaaag
tcacagttaaatgaatctgcaggaagtcaagtgggaacagaattcaaaagtaactttcca
gaaaagaattttaaagttggcatatcagagcagaaatttaaatttgggcatgtggatcaa
gaaaaaacaccctccttcacctttcagggttcttctaatacagaatttaagtcaatcaag
gatggatttagtttttgcattcctgtatctgctgatgggtttaagtttggcattcaggag
aagggaaatcaagagaagaagagtgagaaacatcttgaaaatgatcctggtttccaagct
catgatactagtggtcagaagaatggtagtggtgtggtctttggtcagacaagcagcacc
ttcacctttgcagatcttgcaaagtcaacttcaagagaaggatttcagtttggcaagaaa
gaccctaatttcaagggattttcaggtgcaggagaaaaattattctcatcacaaagtggc
aaagtggctgagaaagcaaatacttctgatcttgagaaagatgacgatgcctataagacc
gaggacagcgatgacatccattttgaaccagtagtgcagatgccggaaaaagtggaactt
gtaacaggggaagaagatgaaaaagttttgtattctcaaagggtgaaattatttagattt
gatgctgagataagtcagtggaaagaaagaggtttggggaacttaaaaattctcaaaaat
gaagtcaatggtaaactaagaatgctgatgcgaagagaacaagtactaaaagtttgtgcc
aatcattggataaccactacgatgaacctgaagcctctctcagggtcagatagagcatgg
atgtggctagccagtgatttctcagatggcgatgctaaactggaacaattggctgcaaag
tttaaaacgccagaactagctgaagaattcaagcagaaatttgaggagtgtcaaagactt
ctcttagacattccacttcagacaccccataaacttgtagatactggcagggctgctaaa
ttaatacaaagagctgaggaaatgaagagcggactgaaagatttcaaaacatttttgaca
aatgatcaagcaaaagtgactgaggaagagaacacaagttcaggtgcagatgcttccagt
gcctcagacactacagtcaagcaaaaccctgataacactgggcccgccttagaatgggat
aactatgacttacgggaagacgccttggatgacagtgtcagcagcagctcagttcatgct
tctccattggcaagcagccctgtgcggaaaaacctcttccgctttggtgagtcaactaca
ggatttaacttcagttttaaatctgctctgagtccatctaagtctcctgccaagttgaac
cagagtggaacttcagttggcactgatgaagagtctgatgttactcaagaagaagagaga
gatggacagtactttgaacctgttgttcccttacctgatctaattgaagtatccagtggt
gaggaaaatgaacaagttgtttttagtcacagagcaaagctctacagatatgataaagat
gttggtcagtggaaagaaagaggcattggagatataaaaattttacagaattacgataat
aaacaggttcgcatagtgatgagaagggaccaggtattaaaactttgtgccaatcatagg
ataactccagatatgactttgcaaactatgaaagggactgaaagagtatgggtgtggact
gcatgtgattttgcagatggagaaagaaaaatagaacatttagctgttcgttttaaacta
caagatgttgcagactcatttaagaaaatttttgatgaagcaaaaacagcacaagaaaaa
gattgtttgataacacctcatgtttctcatctgagcacccctagagagtcaccatgtggc
aaaattgctattgctgtcttagaagaaaccacaagagaaaggacagatttaactcaagga
gatgaggtagtagatacaacttcagaggctggagaaacatctagcacttctgaaacaaca
ccaaaagcagtagtttctcctcctaagtttgtatttggctctgaatctgttaaaagcatt
tttagtagtgaaaaatcaaagccatttgcatttggcaacagttcagccactggttctttg
tttggatttagttttaatgcacctttgaaaaatagcaatagtgaaattagttcaatagtc
cagagtggatctgaagggaaagtagaccctgacaaaggcgagctgccaccgaactctgac
atcaagcaatcttctgatggcaaagtcaagaatctcattgccttttcaaaagagacctct
tcaacgtttaaaacaccagaaaaggcccgagagaagaataaacctgaagatcctccctca
gatactgatattctcattgtgtatgaactcactcccactcctgagcagaaagcccttgca
gagaaacttctgcttccttcaactttcttttgttataagaataggccaggttatgttagt
gaagaagaggaggatgatgaagattttgaaatggccgtcaagaaacttaatggaaaactc
tatgtggatgactcagaaaaaccattggaagaaaatctagcagataatgacaaagaatgt
gttattgtttgggagaagaagccaacagttgaagagagagcaaaagcagatactttaaag
cttccgcctacatttttctgtggagtctgcagtgacactgatgaggacaatggaaatggg
gaggattttcagtcagagcttcggaaagttcaggaagctcagaaatcccagagtgagaaa
gtgactaacacagttggtattgagcagacaggtgagactgaagcaacaaaccccgatggc
tctaagtctgaagaacccgattccgataccaaacacagtagctcatctcctgtccctggg
actatggacaagcctgtagatttgtccactaaaaaagaaactgacatggaattcccaagc
caaggggaaagcaagactgttttgtttggatttggaagtggtacaggcctgtcatttgca
gacttggcttcaagtaattctggagattttgcttttggtcctaaagataaaaatttccag
tgggcaaacactggagcagctgtgtttggaacacagtctacaagtaaagatggtgacgat
gaagatggcagtgatgaagacgtagttcacaatgaggacatccactttgaacccatagtc
tccttaccagaggtagaagtgaaatctggagaagaagatgaagaagttttgttcaaagag
agagccaaactttatagatgggatagagatgtcagtcagtggaaggagagaggtattgga
gatataaagattctttggcattcagtgaagaattattatcggatcctaatgagaagagac
caagtttttaaagtgtgtgcaaaccatgttattaccaaagccatggaattaaaaccttta
aatttttcaaacaatgctttagtttggactgcctcagattatgctgatggagaagcaaaa
atagaacagcttgcagtgagatttaagacaaaggaaataactgagtgttttaagaaaaaa
attgaagaatgtcaacaaaatataatgaaactccagaatggacaagtatcccttgcagcg
gaattatctaaggagaccaatcctgtggtgttttttgatgtttgtgtggatggtgaacct
ctaggacggataatcatggaattattttcaaatattgttcctcaaactgctgagaacttc
agagcattatgcactggagagaagggctttggttttaagaactccatttttcaccgagta
gttccagattttatttgccaaggaggagatattaccaaatacaatggaacaggaggacag
tccatttatggagataaatttgacgatgaaaactttgatctaaaacacactggtcctggc
ttactatccatggccaattgcggccagaataccaacagttctcagttttttataacactg
aagaaagcagaacatttggactttaagcatgtagtgtttgggtttgttaaggatggcatg
gatactgtgagaaagattgaatcatttggttctcctaaagggtctgttagtagaagaatt
tgtatcacagaatgtggacagctataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (11)   
   Pfam (11)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system