KEGG   Rattus norvegicus (rat): 29452
Entry
29452             CDS       T01003                                 
Symbol
Epas1
Name
(RefSeq) endothelial PAS domain-containing protein 1
  KO
K09095  hypoxia-inducible factor 2 alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05200  Pathways in cancer
rno05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    29452 (Epas1)
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    29452 (Epas1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    29452 (Epas1)
   04131 Membrane trafficking [BR:rno04131]
    29452 (Epas1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    29452 (Epas1)
Membrane trafficking [BR:rno04131]
 Autophagy
  Pexophagy
   Other pexophagy associated proteins
    29452 (Epas1)
SSDB
Motif
Pfam: PAS_3 PAS_11 HIF-1a_CTAD HIF-1 PAS PAS_9 PAS_4 HLH Corona_I
Other DBs
NCBI-GeneID: 29452
NCBI-ProteinID: NP_075578
RGD: 68404
Ensembl: ENSRNOG00000021318
UniProt: Q9JHS1
Position
6:complement(13543252..13626147)
AA seq 874 aa
MTADKEKKRSSSELRKEKSRDAARCRRSKETEVFYELAHELPLPHSVSSHLDKASIMRLA
ISFLRTHKLLSSVCSENESEAEADQQMDNLYLKALEGFIAVVTQDGDMIFLSENISKFMG
LTQVELTGHSIFDFTHPCDHEEIRENLTLKTGSGFGKKNKDMSTERDFFMRMKCTVTNRG
RTVNLKSATWKVLHCTGQVRVYNNCPPHSSLCGYKEPLLSCLIIMCEPIQHPSHMDIPLD
SKTFLSRHSMDMKFTYCDDRILELVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKG
QVVSGQYRMLAKHGGYVWLETQGTVVYNPRNLQPQCIMCVNYVLSEIEKNDVVFSMDQTE
SLFKPHLMAMNSIFDSSDDVALSEKSNYLFTKLKEEPEDLAQLAPTPGDAIISLDFGSQN
FDESSTYGKAILPPGQPWATELRSHSAQSESRSLPAFTVPQAGSPGNATPSATSSSSCST
PSSPEDYYSSLENHLKIEVIEKLFAMDTEAKDQCSTQTDFNELDLETLAPYIPMDGEDFQ
LSPICPEEPLVPESPQPNPQHCFSTMSSIFQPLTPGASQGTFFLDKYPQQLESRKTESEH
WPMSTIFFDAGSKGSLPPCCGQASTPLSSMGGRSNTQWPPDPPLHFGPTKWSVGNQSAEP
LGPLPLGTSQLEPPSTPPHVSMFKMRSAKDFGARGPYMMSPAMIALSNKLKLKRQLDYEE
PAFQDTSGGDPPGTSSSHLMWKRMKSLMGGTCPLMPDKTVSASMAPDEFTQKSMRGLGQP
LRHLPPSQPPSTRSPGENAKSGFPPQCYASPFQDYSPPGAQKGSGVASRLLGPSFEPYLL
PELTRYDCEVNVPVPGSSTLLQGRDLLRALDQAT
NT seq 2625 nt   +upstreamnt  +downstreamnt
atgacagctgacaaggagaagaaaaggagcagctcggagctgaggaaggagaaatcccga
gatgccgcacggtgccggcgtagcaaggagacggaggtcttctatgaactggctcatgag
ctgccgctgccccacagtgtgagctcccacctggacaaagcctccatcatgcgcctggcc
atcagcttcctgcgaacacataaactcctgtcttcagtgtgctctgaaaatgaatctgaa
gccgaggctgaccagcagatggataacttgtacctgaaagccttggagggcttcattgcc
gtggtgacccaagacggtgatatgatctttctgtcagaaaacatcagcaagttcatggga
cttacccaggtagaactaacaggacacagcatctttgacttcactcatccttgcgaccac
gaggagatccgcgagaacctgacactcaaaactggctctggttttgggaagaagaacaaa
gatatgtctaccgagcgtgacttcttcatgaggatgaagtgtaccgtcaccaacagaggc
cggactgtcaaccttaagtcggccacctggaaggtcttgcactgcaccgggcaagtgaga
gtctacaacaactgcccccctcacagtagcctctgcggctacaaggagcccctgctgtcc
tgcctcatcatcatgtgtgagccaatccagcacccatcccacatggacatccccttggac
agcaagactttcctaagccgccacagcatggacatgaagttcacctactgtgatgacaga
atcttggaactggttggttaccaccccgaggagctacttggccgctctgcctatgaattc
taccacgccctggactcggagaacatgacaaaaagtcaccagaacttgtgcaccaagggg
caagtggtgtctggccagtaccggatgctggccaaacatggaggatatgtgtggttggag
acccaggggaccgtcgtctacaacccccgcaacctgcagccccagtgtatcatgtgtgtc
aactatgtcctgagtgagatagagaagaatgacgtggtgttctccatggaccagactgaa
tccttgttcaagccacacctgatggccatgaacagcatctttgacagcagtgacgacgtg
gccctatccgagaagagcaactacctgttcaccaaactgaaggaggagccagaggacctg
gcccagctggcccccaccccaggggatgctattatttctctggacttcggaagccagaac
tttgatgaatcctcgacctatggcaaggccatccttcccccaggccagccgtgggccaca
gagctgaggagccacagtgcccagagtgagtccaggagcctgccagccttcaccgtgccc
caggcaggttccccagggaatgccacacccagcgccacaagcagcagcagctgctccacg
cccagcagccctgaggattactactcatctctggagaatcacttgaagatcgaagtaatc
gagaagctcttcgccatggacaccgaggcgaaggaccagtgcagtactcagacggacttc
aatgaactggacttggagaccctggcaccctacatccctatggatggcgaggacttccag
ctcagccccatctgcccggaggagccactcgtgccggagagcccccagcccaacccccag
cactgtttcagtaccatgtcaagcatcttccagccgctcaccccgggggccagccaaggc
accttcttccttgacaagtacccgcagcagttggaaagccggaagacggagtccgagcac
tggcccatgtctaccatcttctttgatgctgggagcaaagggtccctgcccccatgctgt
ggccaggccagcacccctctctcctctatggggggcagatctaacactcagtggccccca
gatccaccattacattttggccctacgaagtggtctgtgggcaatcagagcgctgaaccc
ctggggcctctgccactggggacctcgcagttggagcctcccagcaccccgcctcatgtc
tccatgttcaagatgaggtctgcaaaggactttggggctcgaggcccatacatgatgagc
ccggccatgatagccctgtccaacaagctgaagctaaagcgccagctggactacgaggag
ccagccttccaagacacaagtgggggggaccctccaggcaccagcagttcacacttgatg
tggaaacgaatgaagagcctcatgggcgggacctgtcctttgatgcctgacaagaccgtc
agtgcaagcatggctcctgatgaattcacccaaaaatccatgagaggcctgggccagcca
ctgagacacctgccaccttcccagccaccatctaccaggagtccaggagagaacgccaag
agtgggttcccaccacagtgctatgcctccccgttccaggactacagtcctccaggagct
caaaaggggtcaggagtggcaagtcgactgctggggccatcgttcgagccttacctgctg
ccggaactgaccagatatgactgtgaggtgaacgtcccagtgcctggaagttctacactc
ctgcaggggagagaccttctcagagctctggaccaggccacctga

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