KEGG   Rattus norvegicus (rat): 294562
Entry
294562            CDS       T01003                                 
Symbol
Pou5f1
Name
(RefSeq) POU domain, class 5, transcription factor 1
  KO
K09367  POU domain transcription factor, class 5
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    294562 (Pou5f1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    294562 (Pou5f1)
   03021 Transcription machinery [BR:rno03021]
    294562 (Pou5f1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain POU
    294562 (Pou5f1)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase III system
   Other transcription-related factors
    Octamer transcription factors
     294562 (Pou5f1)
SSDB
Motif
Pfam: Pou Homeodomain Homeobox_KN
Other DBs
NCBI-GeneID: 294562
NCBI-ProteinID: NP_001009178
RGD: 1359491
Ensembl: ENSRNOG00000046487
Vega: OTTRNOG00000001656
UniProt: Q6MG27 B0BMU5
Position
20:complement(3227836..3232598)
AA seq 352 aa
MAGHLASDFAFSPPPGGGDGSAGLEPGWVDPRTWLSFQGPPSGPGIGPGSEVLGISPCPP
AYEFCGGMAYCGPQVGLGLVPQVGVETLQPEGQAGARVESNSEGASSGPCTARPSAVKLE
KVEPSPEESQDMKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVLFGKVFSQTTICRF
EALQLSLKNMCKLRPLLEKWVEEADNNENLQEICKSETLVQARKRKRTSIENRVRWNLEN
MFLQCPKPSLQQITSIAKQLGLERDVVRVWFCNRRQKGKRSSIEYSQREEYEAAGKPFPG
GAVSFPLPPGPHFGAPGYGSPHFTTLYSVPFPEGEAFPSVPVTALGSPMHSN
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggctggacacctggcttcagacttcgccttctcacccccacctggtgggggtgatggg
tcagcagggctggagccgggctgggtggaccctcgaacctggctaagcttccaggggcct
ccaagtgggcctggaatcggaccaggttcagaggtgctggggatctccccgtgtccccca
gcatacgagttctgtggagggatggcatactgtggacctcaggttggactgggcctagtc
ccccaagttggcgtggagactctgcagcccgagggccaggcaggagcacgagtggagagc
aactcggagggagcctcctctgggccctgtactgcccgccccagcgccgtgaagttggag
aaggtggaacctagtcccgaggagtcccaggatatgaaagccctgcagaaggagctagag
cagtttgccaagctgctgaaacagaagaggatcaccttggggtacacccaggccgacgtg
gggctcaccctgggcgttctctttggaaaggtgttcagccagacaaccatctgccgcttc
gaggccctgcagctcagccttaagaacatgtgtaagctgcggcccctgctggagaagtgg
gtggaggaagctgacaacaacgagaaccttcaggagatatgcaaatcggagaccctggtg
caggcccggaagagaaagcggactagcattgagaaccgtgtgaggtggaacctggagaac
atgtttctgcagtgcccgaagccctccctgcagcagatcactagcattgccaagcagctt
gggctggagagggatgtggttcgagtgtggttctgtaaccggcgccagaaggggaaaaga
tcgagcattgaatattcccaacgagaagagtatgaggccgcggggaaacctttcccaggg
ggggctgtgtcctttcctctgcccccaggcccccactttggtgctccaggctatgggagc
ccccatttcaccacactctactcggtcccttttcctgagggcgaggcctttccctctgtt
cctgtcactgctctgggctctcccatgcattcaaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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