KEGG   Rattus norvegicus (rat): 294640
Entry
294640            CDS       T01003                                 
Symbol
Otp
Name
(RefSeq) homeobox protein orthopedia
  KO
K24901  homeobox protein orthopedia
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    294640 (Otp)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain Paired-related
    294640 (Otp)
SSDB
Motif
Pfam: Homeodomain OAR Homeobox_KN
Other DBs
NCBI-GeneID: 294640
NCBI-ProteinID: NP_001093993
RGD: 727945
Ensembl: ENSRNOG00000010560
UniProt: A6I4X3 G3V7E0
Position
2:27842892..27851093
AA seq 325 aa
MLSHADLLDARLGMKDAAELLGHREAVKCRLGVGGSDPGGHPGDLAPNSDPVEGATLLPG
EDITTVGSTPASLAVSAKDPDKQPGPQGGPNPSQAGQQQGQQKQKRHRTRFTPAQLNELE
RSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGTLLPTPG
LPQFPSAAAAAAAAMGDSLCSFHANDTRWAAAAMPGVSQLPLPPALGRQQAMAQSLSQCS
LAAGPPPNSMGLSNSLAGSNGAGLQSHLYQPAFPGMVPASLPGPSNVSGSPQLCSSPDSS
DVWRGTSIASLRRKALEHTVSMSFT
NT seq 978 nt   +upstreamnt  +downstreamnt
atgctgtctcacgccgacctcctggacgccaggctaggtatgaaagatgccgccgagctt
ctgggccaccgggaggcggtgaagtgtaggctgggcgtggggggctctgaccctgggggc
catccaggggacctggcgcccaactccgacccagtcgaaggagccactctgctgccgggc
gaggacatcaccaccgtgggctctactcctgcttcgctggcggtgagcgccaaagaccca
gacaagcagccggggccccagggcggccccaaccccagccaagccggccagcagcagggc
caacagaaacagaagcgccaccggacacgcttcaccccagcgcagctcaacgaattggag
aggagcttcgccaagactcactaccccgacatctttatgcgtgaggagctagcgctgcgt
atcgggctgaccgaatcgcgagtgcaggtctggttccagaatcgccgcgccaagtggaag
aagcgcaagaagaccaccaacgtgttccgcgcgcccggcacgctgctgcccacgccgggg
ctgccccagttcccgtcggccgccgccgccgcggccgccgccatgggcgacagcctgtgc
tctttccacgccaacgacacccgctgggcggcggccgccatgcccggggtgtcccagctc
cctctgccgcctgcgctcggccgccagcaggccatggcgcagtcgctgtcccagtgcagc
ctggcggcggggccaccgcccaactccatgggtttgtccaacagcctggcgggctccaac
ggagcggggctgcagtcgcacctctaccagcccgccttccccggcatggtgcccgcttcc
ctccccggccccagcaacgtctccggctcgccccagctctgcagctctccggacagcagc
gacgtgtggcggggcacgagcatcgcctccctgcgccgcaaggcgctcgagcacacagtc
tccatgagcttcacctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system