KEGG   Rattus norvegicus (rat): 294747
Entry
294747            CDS       T01003                                 
Symbol
Cspg4b
Name
(RefSeq) chondroitin sulfate proteoglycan 4B precursor
Organism
rno  Rattus norvegicus (rat)
SSDB
Motif
Pfam: Cadherin_3 Laminin_G_2 Laminin_G_1 Cadherin_4
Other DBs
NCBI-GeneID: 294747
NCBI-ProteinID: NP_001127982
RGD: 1561161
Ensembl: ENSRNOG00000039582
UniProt: A6I5R3
Position
2:46673142..46743288
AA seq 2236 aa
MGRPWARGLLLLTACLGLCRPLGGLGASFYGESYVGLSMAEVSPELSLQFRFQTSKPQGL
LFLAAGKTDYCLIELLSGTLQVKVKVGTGKQILLSEQRLRVDDLVWHSVGLQCGKDHVSL
VIDKHHETTGQLAGGMRNFTFHHGIYVGGRGGLSVPYLDRKTPNFRGCMEDVVFNQREIL
TSLRSYPGFKKVNEVSLGCSDEFFAGKDEAISFFSSRSYVTFPEWKVYHGEGILRFAVQT
ETPQALLLFQSGRGRDFVALEIHEGQLKAHVGRGGTKTQLSSFSLVSDNKWHIVQLRVAG
RHVDLMVDEHGERAGLPLQSQEFMSEGPLFVGGLNDRMWETAHSLELVSVPGKSIRGLSL
KGCLQALEANLEKRALRDALVSRDVSAGCTSEGLRGTDPPVAGEDVLPPQPSPSTAAPNA
SSPLKNRSGRFLVLNKLEVQEGGRALLGQRHIEVGVDFMYLGINYSQILFNIQEMPMHGF
LQIDVWPAQEMEQTFTLSDLRRGKVWYVHDGSEEPTDCFTFRVSSNSKKVVLSQLQDLVA
HVFNIVVLPVNDPPYLRLPEGHLLLFENTKQRLTPGLMQVLDPDTDAQHLRFSVLNTFSS
EAGFLESAKDPGKAISDFTDADLQDGNIFYVHRGHQNSRIVLRATDGELVSNTVVLRVMA
VPWDFEVADRTGVVVPQGGTVLITGSNLSVKVNGGQHELDTRYDITHPPQFGQIQHLGSN
GEWEPVRTFSQRSVDRGEIRYYSSFKELQQENVTDHFKFKVSIEGRVSKELLFPVTVEWL
QLTLPKNIPLEISNINRKVLDSGHLQAAAGSVQVAERELFFKLLMPPKKGKLLLGDEVLK
SGSMFSQKNVTDSMVSYKPQGRPWEHSQDSFSFSIVVKQVESKGHTFRINLEVDKTHITV
TNTGLYVKEGEWTIITKSEFFVQTLDHRIFQYKVTKSPQHGELKLVSSSTSPGSESRATG
FTDDDIVSERLIYAHDDSETRWDEFVILASATGLGQQGGVRSPDSEHVSTEIKVSISVEL
KNDEKPVRVVDKIFHVVRDSQRLLTLADLCYHDPDVDFDDGQLLYTRHGIPNGDLVKATD
PTQKLYQFRQEDLREGRVLFKHNGPDSARFLLFVTDGVHYTSSLLEVSVSEAYIHIINNT
GLLVHRGRDGFLTTANLSVTTNQDVRTDHEFEFHVVQPPKHGRLLVNNSAFHSFSQHDLK
QGHVTYRYNGDGNSDIFNLTVTVKDTSLDVSVCVQVSSEDHQHYSPILHRESLTVEGKPV
KLSRGKLQVAQESIDYVHNGSEEFDSLTILANSSELGKQSLPQTLFVTVESVNDEAPVVT
ANKVLQVWVNSVTEVTRGDLCAEDGDSSPQDLVYWVTPPSNGHLALRSIPGRSIQNFTQA
QIDEGQLVFVHSGATSGGFSFQVTDGLNSAPRQIFSVTARALIISLEVNRGLSIFPGSTK
PLSSHDLRAVTNDDKAGNRTITFTVVRSPRLGRLLKMYPDSHTEDVSVFTQCLVSEGLIL
YQHLDLDTAWASEDSFTFTASSPPAELGPEDFRITISRETNESGRQNRLRANTGASVKEG
DKVLIDQSKLDASNLLLQLPRPQRSSHEIWYQVTALPHHGTIMVGERNITTEKPYFSQQI
VNAFGVTYLHDDSESLADNFTFAVWPNPKNQSTSKPEADFLEEVFTITITPVNDHPPALK
TKGLRLTVLQGGRLVVGPEILKVEDIDSPPSEIQYVVIRPPNNGFLAMAHAPDDSAHHFT
QADVNNAQVWFIQDGSPSSGVFYFSVTDGEHRPLYKLFHLDVTPISITLVNLTDLLLPQG
QTTVPITNTHLSAVTNGGSPQITYRIAQPLQSGHLLIENQVVSSFRQEDLDSGRLSYHMT
NLTASEDQLRFSLFTTECNLTEQTLGIRVQPLLWVGSNLKVTNRVAHRLRREDLDATELA
NRSKSDPTFEVIQPPIHGRLVRRAVDSPVAEEVTQFTQTDINQGQLVLEPQANLTGTHTL
NDSFTFLLSADDVQPATGHLAFTIVPPDTLPLQIFTPHVPLVVTGETPVASVFSQKKLRA
SIIKQTENPGNLTQRKWQGTDFWGQLSGKEPNIDAKVSPTRVTWPYAATKVGVTLSGEAM
QPEVSRHPLMVIIPLAAVFLLLLVTVVALCVWMLGRKEDRPNPLIQPKTNLKSPSPRFRA
ERSGAIPTVTVTPLIRSSGSPAPSMFQPQSYEQPAPLGAGHIEKCAPWEAWVNLDPDMAK
LCRQTNPALKHNQYWV
NT seq 6711 nt   +upstreamnt  +downstreamnt
atggggcggccctgggcccgtggcctcctcctgctcaccgcctgcctggggctctgccgg
ccgctcggggggcttggagcatctttttatggtgaaagctacgtggggctcagcatggca
gaggtttcccctgagctctcgcttcagttcagatttcaaaccagcaagccacaaggctta
ctcttccttgcagctgggaagactgactactgcctaatagaacttctgtcgggaacatta
caggtaaaagtaaaagtgggcacggggaaacagatcctcctttctgagcaaagacttcgt
gtggatgatttggtctggcattcggtgggactgcagtgtggcaaagatcatgtttccttg
gtcattgacaagcatcatgagacaaccggccagctggctggggggatgcgtaacttcacc
tttcaccatggaatctatgtaggaggtcgtggggggctcagtgtcccttacctggacaga
aagacccccaatttccgaggatgcatggaggatgtggtgtttaaccagagggagatcctt
acgtcccttaggtcttaccctggctttaagaaggttaatgaggtgtcactggggtgtagc
gatgagttttttgctgggaaggatgaggccattagctttttcagctctaggtcctacgtc
accttcccagaatggaaggtgtaccacggggaagggatcctgaggtttgctgtgcaaacc
gaaaccccacaagctttgcttttgtttcagtcaggtagaggaagagattttgttgccttg
gaaatccatgagggtcaactcaaggctcatgtaggaaggggcggaacaaaaactcagctt
tcgtcgttcagcttggttagtgacaacaagtggcacattgttcaactcagagtcgcgggg
aggcatgtggacctcatggtggatgaacatggggaaagggcggggctccctctgcaaagc
caagagttcatgtctgaaggacccctgttcgtgggaggcctgaatgaccggatgtgggaa
acagcacacagcttagaacttgtgtctgtgcccgggaaatccattcgaggcttgtctctg
aaagggtgcctgcaagccttggaagccaatttggaaaagagagcattacgggatgctctt
gtctccagagacgtttctgctgggtgcacaagcgagggtctccgtggtacagatcctcct
gtggcaggggaagatgtgcttccgccacagccatccccttccactgccgcccccaatgcc
agttctcctctgaaaaatcgaagtggcaggtttttggttttgaataagctggaagtccaa
gaaggtggacgggccttactgggacagaggcacatagaagtgggtgtggacttcatgtat
ctgggtatcaattattcccagatactgtttaatatacaggaaatgccaatgcacgggttc
cttcaaatagatgtttggcctgcacaggaaatggagcagacttttactctgtcagatctg
aggcgtgggaaagtgtggtatgtccacgatggttcggaagagcctacagattgttttacg
tttcgggtttcttctaatagcaagaaggtggtgctgtcccagctgcaggatctcgttgca
catgtctttaacattgtcgtccttccagtgaacgaccccccgtatctcaggctcccagaa
ggccacttgcttctctttgagaacaccaagcagcgactaacacctggcctgatgcaggtg
ttagatcctgacacggatgctcaacacctcaggttttcagttcttaacaccttcagttca
gaggctgggtttttagaaagtgccaaggaccctgggaaagccatcagtgatttcacagac
gcggatttacaagatggcaacattttctatgtgcacaggggtcatcaaaactcccggatc
gttctgagagcaactgatggtgaactggttagcaatactgtggtgttgcgggtcatggct
gtcccctgggactttgaagtggctgataggactggcgtggtggtaccacaaggtggtacc
gttctcatcaccgggagcaacttgtctgtgaaggtgaatggtggacaacatgagctggac
actcgctatgacatcacacatccacctcagtttggccaaattcagcatctgggttctaac
ggagaatgggaaccagttaggaccttttctcaacgttctgttgaccggggtgagatccga
tactacagttcattcaaagaattgcagcaagaaaatgttacggatcactttaaatttaaa
gttagcatagagggaagagtaagcaaagagctcctgtttcctgtgactgtggagtggctg
caactgacacttccgaaaaatatccctctggagattagcaacataaacaggaaagtattg
gactctggtcacctgcaggctgcagcagggagtgtgcaagtagctgagagggaactgttt
ttcaagctactgatgccacctaagaaagggaagctgctactcggcgatgaagtacttaaa
tccggttcgatgttcagtcaaaagaacgttacagactctatggtaagctacaaacctcag
gggaggccctgggaacactcccaggattcttttagtttctcaatagttgtaaaacaggta
gaatccaaaggtcataccttcaggataaaccttgaagtagataagacacatatcactgta
acaaacactggactgtatgtaaaagagggagaatggacaataattacaaaatcagaattc
tttgttcaaacattggaccatcgtatcttccaatataaagtcaccaagagtcctcagcat
ggggaattgaaattggtcagctcctctacttctccgggaagtgagagtagggccactgga
ttcacagatgacgacatagtgagtgagaggctgatctatgctcatgatgactctgagacc
cgctgggatgaattcgtcattttggcttctgccacaggcctgggccaacagggaggggtc
agaagccctgactctgagcacgtgtctacagaaatcaaagtcagcatttctgttgagttg
aagaatgatgagaagccagtgcgtgtggtagataaaatctttcatgtcgtgcgggacagc
cagcggttgctgacactagcagatctctgttaccacgaccccgacgtagattttgatgat
ggccagttgctctatactagacatggtataccaaatggagatttggtgaaagccactgac
ccgactcagaagctctaccagttcagacaagaggatctacgggaagggcgtgtgctcttc
aagcacaatggtccagactctgctcggttcctgctgtttgtgacagatggcgtccattat
acgtcatcccttttggaggtcagcgtgtcagaggcctatatccatataattaacaacaca
gggctgcttgtgcacagagggagggacggctttctaacaacagccaacctgagcgtcacc
acaaaccaagacgtcagaacggaccatgagtttgaattccacgtcgtgcaacccccgaaa
catggcagactcctggtcaacaattctgcctttcactcattctcccagcatgacctaaag
cagggacatgtgacttacaggtacaacggcgatggcaactctgatatctttaacctgaca
gtgacagttaaagatacctccctagatgtgagcgtctgtgtccaagtgtcctcagaggat
caccaacattacagtccgattctgcacagggagagccttacagttgaaggaaaaccagta
aaactgagtagaggaaagctccaggtggcgcaggagtcgattgactatgttcataatggc
agtgaggagttcgacagtctcaccatcttggcgaacagctccgagcttgggaaacagagt
ctgcctcagactctgtttgtgaccgttgagtctgtaaatgatgaggctccggtagtaaca
gccaataaagtcctccaggtgtgggtgaattctgtcactgaggtgaccagaggggacctg
tgtgcagaagatggggattcttccccccaggacttggtctactgggttactcctcccagc
aacgggcatctggctctcaggtccattcctggcagaagcatccagaacttcactcaggct
caaattgacgagggtcagctcgtgtttgtgcactctggagcaacgtcaggtggctttagt
ttccaggttactgacggtttgaattccgcacctcgacaaatctttagtgtcactgcccgc
gcgctgatcattagcttagaagtcaacagaggattgagcatcttcccaggttccacaaag
ccactttcgtctcatgacctgagagccgtgaccaatgatgacaaggcaggaaacagaact
ataacatttacggttgtcaggtcccctaggcttgggaggctgctgaagatgtacccggac
agtcacacggaggacgtttccgtttttacccaatgtctggtcagtgaagggctgattctt
taccagcacctggatcttgacacagcatgggcctcagaagactccttcacattcacagca
tcttcccctccagcagagctgggccctgaggatttccggattactatttcacgtgaaacc
aatgagtcgggccgacagaacaggctgcgtgcaaatacaggagcctctgtcaaggaggga
gataaagttctcattgaccaatctaaattagatgcttccaacctcttacttcagctgccc
cgacctcagcgttcttcccatgaaatctggtatcaggttacagctcttcctcaccatgga
accattatggttggagagagaaatattaccacagaaaagccctacttctcccagcaaata
gttaatgcatttggagtcacatatcttcacgatgactctgaatcattggctgataatttt
acctttgctgtttggccaaacccgaagaatcagtccaccagcaagccagaggccgacttt
ctggaagaggtgttcaccatcaccatcacccctgtgaacgatcatcctccagcattaaag
accaaagggcttcggcttacagttctacagggcggtaggttggttgtgggacctgaaatc
ctcaaggtagaagatatagacagtcctccaagtgaaatccaatatgtggtcatccgtcct
cccaacaatggctttttagcaatggctcatgctccagacgacagtgctcaccattttaca
caggctgacgtcaacaacgctcaggtgtggtttatacaagacggaagtccatcctctgga
gtgttttatttcagtgtgactgacggtgaacaccggcctctctataagcttttccacctg
gatgtcacccccatctccatcacgcttgtgaacctcacagacctgcttctcccacaaggc
cagacaactgtccccatcacaaatactcatctctcagcagtgaccaatggtgggagccct
cagatcacctacagaatagcacagcccctccaaagcggccacttgctgattgaaaaccag
gtggtcagcagcttcaggcaagaggatttggattctggaagactctcttaccacatgacc
aatctcacagcctcagaagatcaactgaggttctcactgtttacaacagagtgcaacttg
acagaacagaccctgggcatcagggtacagcctttgttgtgggttggatcaaacttgaaa
gttaccaacagagtggctcaccggctcaggagagaggatctggatgcaactgagctcgct
aacagaagtaagagtgaccccacatttgaagtgatacaaccccccatccatggacgactt
gttcgaagagcagtcgacagccctgtggcggaagaggtcactcagttcacccagacagac
atcaaccaagggcagctggtgcttgagccacaggctaatctaacaggcacccatacactg
aatgactccttcaccttcttgctcagtgcagacgatgtgcagccagcaacaggccatctg
gcctttactatagtgccaccagacaccttacctttacagatattcacaccacatgtgcct
ttagtagtcactggagagacccctgtggcctctgttttctctcagaaaaaacttagggct
tctattataaaacagacagaaaatccaggaaatctgacccagcgcaaatggcaagggaca
gatttctggggtcagctcagtggcaaagaaccaaatatagatgccaaggtctcccccacc
agagtcacttggccatatgctgccaccaaagtgggggtgactctttctggggaagccatg
cagccggaagtgagccgtcaccctctgatggtcatcatacctttggctgctgtgttcctc
ctcctgttagtgactgtggtggccctgtgtgtttggatgctgggccgaaaggaggacagg
cccaatcctcttatccagccaaagacgaacctcaaatccccatccccgcgctttagagca
gagaggagtggagccattcccacagtcacggtgacgccccttattagaagctctggcagc
ccggctcccagtatgttccagccgcaatcgtatgaacagccagcccctctgggggcgggg
catatagagaaatgtgctccttgggaggcgtgggtgaacctggatcctgatatggccaag
ctctgtcgtcaaaccaatccggctctgaaacacaaccagtattgggtataa

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