KEGG   Rattus norvegicus (rat): 294810
Entry
294810            CDS       T01003                                 
Symbol
Tars1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic isoform 2
  KO
K01868  threonyl-tRNA synthetase [EC:6.1.1.3]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    294810 (Tars1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rno01007]
    294810 (Tars1)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rno03016]
    294810 (Tars1)
Enzymes [BR:rno01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.3  threonine---tRNA ligase
     294810 (Tars1)
Amino acid related enzymes [BR:rno01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   294810 (Tars1)
Transfer RNA biogenesis [BR:rno03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    294810 (Tars1)
 Prokaryotic type
    294810 (Tars1)
SSDB
Motif
Pfam: tRNA-synt_2b HGTP_anticodon TGS tRNA_SAD
Other DBs
NCBI-GeneID: 294810
NCBI-ProteinID: NP_001006977
RGD: 1359527
Ensembl: ENSRNOG00000019023
UniProt: Q5XHY5
Position
2:complement(62095978..62114802)
AA seq 695 aa
MSEEKASSPSGKMDGEKPLNPWPEYINTRLDMYHKLKAEHDSILAEKAAKDSKPIKVTLP
DGKQVDAESWKTTPYQIACGISQGLADNTVVAKVNKVVWDLDRPLETDCTLELLKFEDEE
AQAVYWHSSAHIMGEAMERVYGGCLCYGPPIENGFYYDMYLEEGGVSSNDFSSLETLCKK
IIKEKQTFERLEVKKETLLEMFKYNKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRH
TGKIKTLKIHKNSSTYWEGKADMETLQRIYGISFPDPKLLKEWEKFQEEAKNRDHRKIGR
DQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGH
WQHYSENMFSFEVEKEQFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGA
LTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGD
IEIWNQAEKQLENSLNEFGEKWELNPGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLP
IRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGP
TCDEYAQKVRQEFHDAKFMVDIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTVNI
RTRDNKVHGERTVGETVERLQQLKQLRSKQAEEEF
NT seq 2088 nt   +upstreamnt  +downstreamnt
atgtcggaggagaaggctagcagcccttcggggaagatggacggcgagaagccgttgaat
ccctggccggagtacattaacacacgccttgatatgtaccacaagctcaaagcagagcat
gattccatcctggctgaaaaggcagcaaaagacagcaagccgattaaagtcaccctgccc
gacggcaagcaagtggatgctgagtcctggaaaaccacgccgtatcagattgcatgtggc
attagccagggcctggctgacaacaccgttgttgctaaggtgaacaaggttgtttgggac
ctggaccgcccgctggagacagactgcactctggagctgctcaagtttgaggacgaggaa
gcacaggcagtatattggcactctagtgcccacataatgggtgaggccatggaaagagtc
tacggtggatgcttatgttacggccctccaatagaaaacggcttctattatgatatgtac
cttgaagaagggggtgtgtccagcaatgatttctcttccctggaaactttgtgtaagaaa
atcattaaagagaaacaaacttttgaaagattggaagttaaaaaggaaacattactagaa
atgttcaagtacaacaagttcaagtgccggatattgaatgagaaagtgaatactccgacc
acgactgtctatagatgtggccccttgatagatctctgccgtggtcctcacgtccgacac
actggcaagattaagactctgaaaatacacaagaattcctccacgtactgggaaggcaaa
gcggacatggaaacgctccagaggatttatgggatttcattccccgaccccaaactactg
aaagagtgggagaagttccaagaggaagccaagaaccgagaccataggaagattgggcgg
gaccaagaactatatttcttccacgaactcagccctggaagttgctttttcctgccaaaa
ggagcctacatttataatacactgatggaattcatcaggagtgaatataggaaaagaggg
ttccaggaggtcgtcacccccaacatcttcaatagccggctctggatgacctctggccac
tggcagcactacagtgaaaacatgttctcctttgaggtggagaaggagcagtttgccctc
aagcccatgaactgcccaggacactgcctgatgttcgatcatcggccgaggtcctggcga
gagctgcccctgcggttagctgattttggagtgcttcacaggaacgagctctcaggggct
ctcactggactcacacgggtccgaagattccagcaggatgacgcacacatattctgtgcc
atggagcagattgaagatgagatcaaaggttgtttggattttcttcgcacggtatatagt
gtctttggattttcatttaaactgaatctttctactcgcccagaaaaattcctgggagat
attgaaatatggaaccaagctgagaaacaacttgaaaacagtttgaacgaatttggtgag
aagtgggagctaaatcctggcgatggagccttctatggtccaaagattgatatacagata
aaggacgctattggccgctaccaccagtgtgcgaccatccagctggactttcagttgccc
atcaggtttaacctcacttacgtcagccatgatggcgacgataagaagaggccagtgatc
gttcaccgagccatcctggggtcagtggagagaatgattgccatcctcacggaaaactat
gggggcaaatggcctttctggctctctcctcgccaggtgatggtggtcccagtgggaccg
acctgtgatgaatatgcccaaaaggtacggcaagaattccacgatgctaagttcatggtg
gacattgacctggatccaggctgtaccttgaataagaagatcagaaatgcacagttggca
cagtataacttcatccttgttgttggtgaaaaagagaaagccagtggcactgtgaacatc
cgcacgagagacaacaaggtccacggagagcggactgtgggggaaacagtggagcggctg
cagcagctcaagcagttgcgcagtaagcaggcagaggaggagttttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (34)   

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