KEGG   Rattus norvegicus (rat): 29486
Entry
29486             CDS       T01003                                 
Symbol
Smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
  KO
K06669  structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04110  Cell cycle
rno04114  Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    29486 (Smc3)
   04114 Oocyte meiosis
    29486 (Smc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    29486 (Smc3)
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:rno00535]
    29486 (Smc3)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    29486 (Smc3)
  Meiosis-specific proteins
   Cohesin complex and associated proteins
    29486 (Smc3)
Proteoglycans [BR:rno00535]
 Extracellular matrix (ECM) proteoglycans
  Basement membrane proteoglycans
   29486 (Smc3)
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_15 AAA_21 AAA_23 AAA_29 OmpH FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 29486
NCBI-ProteinID: NP_113771
RGD: 62006
Ensembl: ENSRNOG00000014173
UniProt: A6JHW2
Position
1:262606731..262649832
AA seq 1217 aa
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLDHFRRKGINQHVQNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgtacatcaagcaggtgattatccagggcttccgaagttaccgagatcaaacaattgta
gatcccttcagttcaaaacataatgttattgtgggcagaaatggatctggaaaaagcaac
tttttttatgcaatccagtttgttctcagtgatgaatttagtcatcttcgtccagagcag
cgattggctttgttgcacgagggtacaggtcctcgtgttatttctgcttttgtggaaatc
atttttgacaattcagacaaccggttaccaattgataaagaggaagtttcgcttcgaaga
gttattggtgccaaaaaagatcagtatttcctagataagaagatggtcacgaaaaatgat
gtgatgaatctccttgaaagtgctgggttttcgagaagtaatccttattacattgttaaa
caaggaaagatcaaccaaatggcaacagcaccggattctcagagattaaagctgttgaga
gaagtagctggcactcgagtgtatgacgagcgcaaagaggaaagcatctccctgatgaaa
gaaacagagggcaaacgggaaaagatcaatgagttgttaaaatacattgaagagcgatta
catactctagaggaggagaaggaggaactggcccagtatcagaagtgggataaaatgagg
cgtgccctggagtacaccatctacaaccaggagctcaacgagactcgcgccaagcttgat
gagctttctgctaagcgagaaacaagcggagagaaatccagacaattaagagatgcccag
caggatgcaagagataaaatggaggatattgagcgccaagttagagaactgaaaacaaaa
atttcagccatgaaagaagaaaaagaacagctcagtgcggagagacaagagcagattaag
caaaggaccaagctggagcttaaagccaaggacttacaggatgagctggcagggaacagt
gagcagcggaaacgtttattaaaagaaagacagaagctgcttgaaaaaatagaagaaaag
cagaaagaactggcagaaacagaaccgaaattcaacagcgtaaaggaaaaagaagagcga
ggaattgctagattggctcaagctacacaggaaagaactgatctttatgcaaagcagggt
cgaggaagccagtttacatcaaaagaagaaagagataagtggattaagaaggaactgaag
tctttagatcaggctattaatgataagaaaagacagattgctgctatacacaaggatttg
gaggataccgaggccaataaagagaaaaatctggagcaatataataaactggatcaggat
ctcaatgaagtcaaagctcgagttgaagaactggacagaaaatattatgaagtgaaaaat
aagaaagatgaactacaaagtgaaagaaattacttgtggagagaggagaatgcagaacag
caagcacttgccgctaagagagaagaccttgagaagaagcagcagcttcttagagcggca
acaggaaaggccattttaaatggaatcgacagcattaacaaagtgttagaccatttccgg
cggaagggtataaaccagcatgtgcaaaatggctaccatggcatcgtgatgaataacttt
gagtgcgaaccagctttctatacttgtgtggaagtcactgccggtaacaggttattctat
cacattgtcgattcagatgaagtcagcacgaagatcttaatggagttcaataaaatgaat
cttcctggagaggtgactttcctgcctcttaacaagttagatgtgagggacactgcctat
cctgaaactaacgatgctattcctatgatcagtaagctgaggtacaatcccagattcgac
aaagctttcaaacatgtgtttggaaagacactcatctgtcggagcatggaggtttccact
cagctagctcgtgccttcactatggactgcattactctggaaggtgatcaagtcagccat
cgaggtgctctgactggaggctattacgacacaagaaagtctcgccttgagttacagaag
gatgttaggaaagcagaggaggagctgggtgagctcgaagctaagctcaatgaaaacctg
cgcagaaacattgaaaggattaataatgaaattgatcaattgatgaaccaaatgcagcag
atagagacccaacagagaaaatttaaagcatccagagatagcatcttatcagagatgaag
atgctaaaagagaagagacagcagtcagaaaagaccttcatgccaaagcaacgcagtttg
cagagtctggaggccagtctgcacgctatggagtcgaccagagagtcgctgaaggcagag
ctagggacagatttgctctctcagctcagcctggaagaccagaaaagagtcgacgcactg
aatgacgagatccggcagcttcagcaggaaaacagacagctgctgaatgaaagaattaaa
ctagaaggcattattactcgagtagagacttacctcaatgagaatctgaggaaacgtctg
gaccaagtagagcaggaacttaatgaactgagagagacagaaggtggcactgttcttact
gccaccacgtcagaacttgaagctattaataaaagagtgaaagatactatggcaagatca
gaagatttggataattccattgacaaaacagaagctggaattaaagagctccagaaaagc
atggagcgctggaagaacatggagaaggagcacatggatgccataaatcacgacactaaa
gagctggagaagatgaccaaccgacagggcatgctgttgaagaagaaagaggagtgcatg
aagaagatccgagagctggggtcccttccccaggaagcatttgaaaagtaccagacactg
agcctgaagcagttgtttcggaaacttgagcagtgcaacacagagttgaagaagtacagc
catgtcaacaagaaggctctggaccagtttgtgaatttctctgagcagaaggagaaactg
ataaagcgacaggaagaattggacaggggctacaagtcaatcatggagttgatgaatgta
ctcgaacttagaaaatatgaagctatccagttaaccttcaaacaggtatctaagaacttt
agtgaagttttccagaagttggtacctgggggaaaagcgaccttggtgatgaagaaagga
gacgtggagggcagccagtctcaggacgaaggagaggggagcggcgagagcgagaggggc
tctgggtcacaaagcagcgttccatcagttgaccagttcacaggagtcgggatcagggta
tcatttacaggaaagcaaggcgagatgagagaaatgcagcagctttcaggagggcagaag
tctctggtagcccttgctctcatttttgccattcagaagtgtgaccctgctcctttctac
ctgtttgatgagatcgaccaagctttggatgctcagcacagaaaagctgtgtcagatatg
attatggaactagctgtacacgcccagtttatcactaccacttttaggcctgaactgctt
gagtctgctgataaattctacggtgtaaagttcagaaataaggttagtcacatcgacgtg
atcacagcagagatggccaaagactttgtagaagacgataccacgcatggttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (34)   
   RefSeq(nuc) (2)   
   GenBank (16)   
   EMBL (16)   
Protein domain (8)   
   Pfam (8)   
All databases (57)   

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