KEGG   Rattus norvegicus (rat): 29491
Entry
29491             CDS       T01003                                 
Symbol
Itsn1
Name
(RefSeq) intersectin-1 isoform a
  KO
K20045  intersectin
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    29491 (Itsn1)
Membrane trafficking [BR:rno04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    29491 (Itsn1)
  Lipid raft mediated endocytosis
   Caveolin-mediated endocytosis
    29491 (Itsn1)
 Others
  Rho GTPase associated proteins
   Rho guanine nucleotide exchange factors (GEFs)
    29491 (Itsn1)
SSDB
Motif
Pfam: PH_13 SH3_1 SH3_9 SH3_2 INTAP RhoGEF EF-hand_4 C2 EF-hand_1 EF-hand_6 EF-hand_7 PH EF-hand_5
Other DBs
NCBI-GeneID: 29491
NCBI-ProteinID: NP_001129568
RGD: 2935
Ensembl: ENSRNOG00000002001
UniProt: Q9WVE9
Structure
Position
11:44464515..44646598
AA seq 1713 aa
MAQFPTPFGGSLDIWAITVEERAKHDQQFQSLKPISGFITGDQARNFFFQSGLPQPVLAQ
IWALADMNKDGRMDQVEFSIAMKLIKLKLQGYQLPPALPPVMKQQPAAISSAPAFGIGGM
AGMPPLTAVAPVPMGSIPVVGMSPPLVSSVPQAAVPPLANGAPPVIQPLPAFAHPAATLP
KSSSFSRSGPGSQLNTKLQKAQSFDVASAPAAAEWAVPQSSRLKYRQLFNSHDKTMSGHL
TGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLIDVAMSGQPLPPVLP
PEYIPPSFRRVRSGSGMSVISSSSADQRLPEEPSSEDEQQVEKKLPVTFEDKKRENFERG
NLELEKRRQALLEQQRKEQERLAQLERAEQERKERERQEQERKRQLELEKQLEKQRELER
QREEERRKEIERREAAKRELERQRQLEWERNRRQELLTQRNKDQEGIVVLKARRKTLEFE
LEALNDKKHQLEGKLQDIRCRLATQRQEIESTNKSRELRIAEITHLQQQLQESQQMLGRL
IPEKQILSDQLKQVQQNSLHRDSLLTLKRALEAKELARQQLREQLDEVEKETRSKLQEID
VFNNQLKELREIHSKQQLQKQRSIEAERLKQKEQERKSLELEKQKEEGQRRVQERDKQWQ
EHVQQEEQQRPRKPHEEDKLKREDSVKKKEAEERAKPEVQDKQSRLFHPHQEPAKPAQAP
WPTTEKGPLTISAQESAKVVYYRALYPFESRSHDEITIQPGDIVMVDESQTGEPGWLGGE
LKGKTGWFPANYAEKIPENEIPTPAKPVTDLTSAPAPKLALRETPAPLPVTSSEPSTTPN
NWADFSSTWPSSTNEKPETDNWDTWAAQPSLTVPSAGQLRQRSAFTPATATGSSPSPVLG
QGEKVEGLQAQALYPWRAKKDNHLNFNKSDVITVLEQQDMWWFGEVQGQKGWFPKSYVKL
ISGPVRKSTSIDTGPTEAPSSLKRVASPAAKPAIPGEEFVAMYTYESSEHGDLTFQQGDV
IVVTKKDGDWWTGTVGETSGVFPSNYVRLKDSEGSGTAGKTGSLGKKPEIAQVIASYTAT
GPEQLTLAPGQLILIRKKNPGGWWEGELQARGKKRQIGWFPANYVKLLSPGTSKITPTEL
PKTAVQPAVCQVIGMYDYTAQNDDELAFSKGQIINVLSKEDPDWWKGEVSGQVGLFPSNY
VKLTTDMDPSQQWCSDLHLLDMLTPTERKRQGYIHELIVTEENYVNDLQLVTEIFQKPLT
ESELLTEKEVAMIFVNWKELIMCNIKLLKALRVRKKMSGEKMPVKMIGDILSAQLPHMQP
YIRFCSCQLNGAALIQQKTDEAPDFKEFVKRLAMDPRCKGMPLSSFILKPMQRVTRYPLI
IKNILENTPENHPDHSHLKHALEKAEELCSQVNEGVREKENSDRLEWIQAHVQCEGLSEQ
LVFNSVTNCLGPRKFLHSGKLYKAKSNKELYGFLFNDFLLLTQITKPLGSSSTDKVFSPK
SNLQYKMYKTPIFLNEVLVKLPTDPSGDEPIFHISHIDRVYTLRAESINERTAWVQKIKA
ASELYIETEKKKREKAYLVRSQRATGIGRLMVNVVEGIELKPCRSHGKSNPYCEVTMGSQ
CHITKTIQDTLNPKWNSNCQFFIRDLEQEVLCITVFERDQFSPDDFLGRTEIRVADIKKD
QGSKGPVTKCLLLHEVPTGEIVVRLDLQLFDEP
NT seq 5142 nt   +upstreamnt  +downstreamnt
atggctcagtttccgacaccttttggtgggagcctggacatctgggccataaccgtggag
gaaagagccaagcatgaccagcagttccagagtttgaagccgatatctggattcatcact
ggtgatcaagcaaggaacttctttttccaatctgggttacctcagcccgtcttagcacaa
atatgggcgctggctgacatgaataaggacggaaggatggatcaggtggagttttccata
gccatgaagctcatcaaactgaagctgcaaggatatcagctcccccccgcacttccccct
gtcatgaagcagcagccagcggccatctctagtgcaccagcgtttggtataggagggatg
gctggaatgccaccactgacagctgttgctcccgtgccaatgggctccatcccagttgtt
ggaatgtctccgcccttagtatcttctgtccctcaagcagcagtgcctcccctggctaac
ggggcccctcctgtcatacagcctctgcctgcatttgctcatcctgcagccacattgcca
aagagttcttccttcagcagatctggtccagggtcacaattaaacactaaactacagaag
gcacaatcatttgatgtagccagcgcccctgcagcggcagaatgggctgtgcctcagtcg
tcaagactgaaatacaggcagttattcaacagtcacgacaagaccatgagtggacactta
acaggtccccaggcaagaactattctcatgcaatcaagtttaccccaggctcagctggct
tcaatctggaatctttccgacattgatcaagatggaaagctcaccgcagaagaattcatc
ctagcgatgcacctgattgatgttgctatgtctggtcagccactgccgcctgtcctgcct
ccagaatacatccctccttcctttagaagagttcgctctggcagtgggatgtccgtcata
agctcttcgtctgcagaccagcggctgcccgaggagccatcgtcagaggatgagcagcag
gtggaaaagaagctgcctgtgacatttgaagataagaagcgggagaacttcgagcgaggc
aacctggagctggagaagcgcaggcaggccctcctggagcagcagcgcaaggagcaggag
cggctggctcagctggagcgcgccgagcaagagaggaaagagcgggagcgccaggaacag
gagcgcaagagacagctagagctggagaagcagctagaaaagcagcgggagctggagagg
cagagagaggaggagagaaggaaggagatcgagaggcgggaggcagcaaaacgggagctc
gaacggcagcgacagcttgaatgggaacggaaccggagacaggaactcctgactcagagg
aacaaggaccaggagggcatcgtggttctgaaggcgaggaggaagactctggagtttgaa
ttagaagctctgaatgacaaaaagcatcagctggaaggaaaacttcaggatatcaggtgt
cgactggcaacccagaggcaagaaattgagagcacaaacaagtctagagagctgagaatt
gcggaaatcacccacttacagcaacagttgcaggaatctcagcagatgcttggaagactt
attccagagaagcagatactcagtgaccagttaaaacaagtccagcagaacagcttgcat
agagattcacttcttaccctcaaaagagccttggaagcaaaggaactggcccggcagcag
cttcgagagcagctggacgaggtggagaaagagaccaggtcaaagctgcaggagattgat
gttttcaacaaccagctgaaggaactgagagagatacacagtaaacagcagctccagaag
cagaggtccatcgaggcggagaggctaaagcagaaagagcaggagaggaagagcctggag
ttggagaagcaaaaggaagaaggtcagagacgagttcaggaaagggacaagcaatggcag
gagcatgtgcagcaggaggagcagcagcgccctcggaaaccccacgaggaggacaaactg
aaaagggaagacagtgtcaagaagaaggaggcggaagagagagccaagccggaagtgcaa
gacaagcagagtcggcttttccatccacatcaagagccagctaagccggcgcaggcaccc
tggcccacgacagagaaaggtccgcttacaatctctgcacaggagagtgccaaagtggtg
tattaccgagcgctgtacccctttgagtccagaagtcatgacgagatcaccatccagcca
ggagatatagtcatggtggatgaaagccagaccggagagccaggatggcttggaggagaa
ctgaaggggaagacaggatggttccctgcaaactatgcagagaagattccagaaaatgag
attcccactccagccaaaccagtgaccgatctgacatctgcccctgcccccaaactggct
ctgcgtgagacccctgctcctttgccagtgacctcttctgagccctccacaacccccaac
aactgggcagacttcagttccacgtggcccagcagcacaaatgagaaaccagaaacggac
aactgggacacgtgggcggctcagccttctctgactgtacccagtgctggccagttaagg
cagaggtcggccttcacaccagccacagccactggctcctccccttctcccgtcctgggc
cagggtgaaaaggtggaagggctccaagcacaagccctgtatccctggagagccaaaaaa
gacaaccacttaaattttaacaaaagtgatgtcatcaccgttctggaacagcaagacatg
tggtggtttggagaagttcaaggtcagaagggttggttccccaagtcttacgtgaaactc
atttcagggcccgtaaggaaatccacaagcatcgatactggccctacggaagctccctct
agtctaaagagagtggcttccccagccgccaagccagccattcctggagaagaatttgtt
gctatgtacacttacgagagttctgagcatggagatttaacctttcagcaaggggatgtg
attgtggttaccaagaaggatggtgactggtggacgggcacagtgggcgagacgtccgga
gtcttcccttctaactatgtgaggcttaaagactcagagggctctggaactgcggggaaa
acagggagtttaggaaaaaaacctgaaatcgcccaggtcattgcttcctacactgctacg
ggtcctgaacagctcaccctggctcctggtcagctgattttgatccgaaaaaagaacccc
ggtggatggtgggaaggagaactacaagctcgagggaaaaagcgccagatagggtggttc
ccagcaaattatgtcaaacttctaagccctggaacaagcaaaatcaccccaactgagcta
cccaagaccgcagtgcagccagcagtgtgccaggtgatcgggatgtacgattacaccgcg
cagaatgacgatgagctagccttcagcaaaggccagatcatcaacgtcctcagcaaggag
gacccggactggtggaaaggagaagtcagtgggcaggttgggctcttcccgtccaattat
gtgaagctgaccacagacatggaccccagccagcaatggtgctcagacttacatctctta
gatatgttgaccccgactgagaggaagaggcaaggctacatccatgaactcattgtcaca
gaggagaactatgtgaacgacctgcagctggtcacagagatctttcagaaacccctgacg
gagtctgagctgctgacagaaaaagaggttgctatgatttttgttaactggaaggagctg
attatgtgtaatatcaaactgctgaaggcgctgagagtccgcaagaagatgtccggagag
aagatgccggtgaagatgatcggtgacatcctgagcgcccagctgccccacatgcagcct
tacatccgcttctgcagctgccagctcaatggggccgccctcatccagcagaagacagat
gaggctccagacttcaaggagttcgtcaaaagactggcaatggaccctcggtgcaaaggc
atgccactgtccagcttcatactgaaacctatgcagcgtgtcacaagatacccactgatc
attaaaaacatcctggaaaacactcctgaaaaccaccccgaccacagccacctgaagcac
gccctggagaaagcagaagagctgtgctcccaagtgaacgagggagttcgagagaaggag
aactctgaccggctggagtggatccaggcgcatgtgcagtgcgaaggcctttctgagcaa
ctggtgttcaattcggtgaccaactgcttgggaccacgcaagtttctgcacagcgggaag
ctctacaaggccaagagcaacaaagagctgtatggcttcctcttcaatgacttcctcctg
ctgacccaaatcacaaagcccttaggctcttccagcactgacaaagtcttcagccccaaa
tctaacctgcagtataaaatgtacaaaacgcccattttcttaaatgaggttctagtaaaa
ttgcccacggacccttctggagatgaacctatctttcacatttcgcacattgaccgagtc
tacacgctccgagcagaaagtataaatgagaggactgcctgggtgcagaaaatcaaggcc
gcatctgagctctacatagagacggagaaaaagaagcgagagaaggcgtatctggtccgt
tcccagagagcgaccggtattggaagattgatggtgaacgtagtagaaggcattgagctg
aagccctgtcggtcacatggaaagagcaacccgtactgtgaggtgaccatgggctctcag
tgccacatcaccaagacaatccaggacacgctgaaccctaagtggaattctaactgccag
ttcttcatcagagacctggaacaggaggttctctgcatcactgtgtttgagagggaccaa
ttctcgccagacgattttttgggtcggacagagatccgagtggccgacatcaagaaagac
cagggctccaaggggccagttacaaagtgtctcctgctgcatgaggtgcccacaggagag
attgtggttcgccttgacctgcagttgtttgatgagccgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (14)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (12)   
DNA sequence (16)   
   RefSeq(nuc) (12)   
   GenBank (2)   
   EMBL (2)   
3D Structure (1)   
   PDB (1)   
Protein domain (13)   
   Pfam (13)   
All databases (53)   

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