KEGG   Rattus norvegicus (rat): 294932
Entry
294932            CDS       T01003                                 
Symbol
Spata16
Name
(RefSeq) spermatogenesis-associated protein 16 isoform X2
  KO
K26121  spermatogenesis-associated protein 16
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    294932 (Spata16)
Cilium and associated proteins [BR:rno03037]
 Motile cilia and associated proteins
  Sperm associated proteins
   294932 (Spata16)
SSDB
Motif
Pfam: NYD-SP12_N TPR_2 DUF3856
Other DBs
NCBI-GeneID: 294932
NCBI-ProteinID: XP_008759122
RGD: 1563726
Ensembl: ENSRNOG00000024521
Vega: OTTRNOG00000002148
UniProt: D4A260
Position
2:111413958..111794348
AA seq 571 aa
MDSGKSRSLETTVKRVYRDLLLPKINTSKKMSTLTNSPNSLEGPPEIKKSCGEKQAETSA
ERVKLTKSIKEKQSNELEKVALKRKVDSEEKLVGKKEAKVMELDSQVLTTIPLPHIPLKN
IMDVEMKLVYVDEEDVSYEFAQSYMCPGLQTTGQIATMMFPTSTRDHATLPQIDKWLQVA
LKDASSCYRQKKYAVAAGQFRTALELCSKGAALGKPFEAHAEDIASVASFIETKLVTCYL
RMRKPDLALNHAHRSIVLNPAYFRNHLRQAAVFRCLERYSEAARSAMIADYMFWLCGGSE
HCVSKLIKLYWQAMIEEAITRAEAFSVMYTPFATKIRADKIEKVKEVFTKTHPAYVECIY
TDTQGFHVLPQTADWSCFPPQQYLLTLGFKNKEDGKFLEKVSNRKLPTFTEHKTPFSPLT
REDTVRHMEMVGKRILPILDFIRSTQLNGNFHACSGVMEKLHYASLLSRLQRVKEQAQVI
NQAMAELATVPYLQDISQQEAELLQSLMADAMDTLEGRKNDKERVWNTIQKVGRIEDFLY
QLEDSFLKTKKLRTARRQKTKMKRLQTVQQN
NT seq 1716 nt   +upstreamnt  +downstreamnt
atggattctggcaagagtaggagtttggagactacagtgaagagagtctatcgtgatctg
cttcttccaaagataaatacaagcaagaaaatgtccaccttaacaaattcccccaacagc
ctggaagggccacctgaaatcaagaagagctgtggggaaaaacaagctgaaacctccgct
gagagagtaaagctcacaaagagcatcaaagaaaagcaaagcaacgagttagagaaggtg
gcccttaaacggaaggttgacagtgaggagaagctagttggaaagaaagaggcaaaggta
atggaactggacagccaggtgctcaccaccatacctctgcctcacatccccttaaagaac
ataatggatgtggaaatgaagctggtctacgttgacgaagaagatgtgagctatgagttt
gctcagtcctacatgtgccctgggcttcaaacaacaggccaaattgctaccatgatgttc
cctacaagtacccgagatcatgccaccctgccacagattgacaaatggcttcaggtagcc
ttaaaggatgccagctcttgctatagacagaagaaatacgcagtggcagcaggacagttc
aggacagcacttgagctttgcagcaaaggggcagctctggggaaaccctttgaagcacac
gctgaagatatagcaagcgtggctagtttcattgagacgaagctcgtcacatgctaccta
cgtatgcggaaacctgacctcgccctgaaccacgcacacaggagtattgttttaaaccca
gcctatttccgaaaccatcttcgtcaggcagccgtgtttagatgtctggagagatactca
gaagctgcccggagtgccatgatcgcggactacatgttctggctctgtggaggaagcgag
cactgtgtaagcaagctcatcaaactgtattggcaggccatgattgaagaagccatcacc
agagcggaagctttctcggttatgtacacaccctttgccacaaaaataagggctgataaa
atagaaaaggtgaaagaggtgttcacgaaaactcaccctgcctatgtggagtgcatctac
acagatacccaagggttccatgtactgccacagacagctgactggtcctgttttcctccc
caacaatatctgttgactcttggattcaaaaacaaagaagatggaaagtttctggagaaa
gtgtcaaataggaagctgcccaccttcacagaacataaaactcccttctctccactgacc
agagaagatacagtgagacacatggagatggtggggaagcgaatcttgccaatcctggac
tttatccgaagcacgcaactaaatgggaatttccatgcatgctcaggtgtgatggagaag
ttgcactatgccagcctcctcagccggctgcagagagtgaaggagcaggcccaggtgatc
aatcaagcaatggcagagctggcaaccgtcccttatctgcaggacatcagtcaacaggag
gcagaattgctgcagtcactaatggcagacgccatggacacccttgaaggaaggaagaat
gataaggagcgtgtgtggaatacgatccaaaaggtcggacgaatagaagactttctgtac
caactagaagacagcttcttaaaaactaagaaactgagaactgctcgaaggcagaagaca
aaaatgaagagacttcaaactgtacagcaaaactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (11)   
   UniProt (1)   
   RefSeq(pep) (10)   
DNA sequence (10)   
   RefSeq(nuc) (10)   
Protein domain (3)   
   Pfam (3)   
All databases (34)   

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