KEGG   Rattus norvegicus (rat): 294975
Entry
294975            CDS       T01003                                 
Symbol
Exosc9
Name
(RefSeq) exosome complex component RRP45
  KO
K03678  exosome complex component RRP45
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    294975 (Exosc9)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    294975 (Exosc9)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     294975 (Exosc9)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 294975
NCBI-ProteinID: NP_001020577
RGD: 1307888
Ensembl: ENSRNOG00000014674
UniProt: Q4QR75 A6IHY2
Position
2:121344154..121355110
AA seq 437 aa
MKETPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVS
CELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTES
LCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGEEVTLYTPEER
DPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHREICTIQSSGGI
MLLKDQVFRCSKIAGVKVAEITELIQKALENDQRVRKEGGKFGFAESIANQRITAFKMEK
APIDTSNIEEKAEEIIAEAEPPPEVVSKPVLWTPGTAQIGEGIENSWGDLEDSEKEEEEE
GGIDETVILDDTKMDTGEVSDIGSQGAPIVLSDSEEEEMIILEPEKSPKKIRAQTSANQK
APSKSQGKRRKKKRTAN
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgaaggaaacgccgctttccaactgcgagcgccgcttcctgctccgtgcaattgaggag
aagaagcggctggatggcagacaaacctatgattacaggaacatcaggatctcattcgga
acggattatggatgctgtattgtagaactggggaaaacaagagtcctcggacaggtttcc
tgtgaacttgtttctccaaagctcaatagggcaacagaaggtattctcttttttaacctt
gagctttctcagatggctgctccagcttttgaacctggcaggcagtcagatctcttggtg
aagctgaatcggctcttggaaaggtgtctaagaaattcaaagtgcatagacactgaatct
ctctgtgttgtcgctggtgaaaaggtttggcagatacgtgtagacctacatttattaaat
catgatggaaatattattgatgctgctagcattgctgcaatcgtggccttgtgtcacttc
cgaagacccgatgtctctgtccaaggagaagaagtaacattgtatacccctgaggagcgt
gatcctgtgcctttgagcatacaccatatgcccatctgtgtcagttttgctttcttccag
caaggaacatacttattggtggaccccaatgagcgtgaagagcgagtgatggatggcctg
ctggtgatcgccatgaacaagcatcgagaaatctgtacgattcagtctagtggtgggata
atgctgctcaaagaccaggttttcaggtgcagtaaaatagctggtgtgaaagtagcagaa
atcacagagctaatacagaaagctttggaaaatgaccagagagttaggaaagaaggtgga
aaatttggctttgcagagtctatagcaaatcagagaatcacagcatttaaaatggagaag
gcccctattgatacctccaacatagaagagaaagcagaagaaattattgcggaagccgaa
cctcctccagaggttgtttctaaacctgtgctgtggactcctggaactgcccagattgga
gagggaatagaaaactcctggggtgaccttgaagattctgagaaggaagaggaggaggaa
ggtggcattgatgaaactgtcattcttgatgatacaaagatggacacgggagaagtttct
gatattgggagccaaggtgcccctatagtgctatcagatagtgaagaagaagaaatgatt
attttggagccagagaagagtccaaaaaaaataagagctcagaccagtgcaaaccagaag
gcaccaagtaaaagtcaagggaaaaggaggaaaaagaagagaactgctaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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