KEGG   Rattus norvegicus (rat): 295106
Entry
295106            CDS       T01003                                 
Symbol
Ift80
Name
(RefSeq) intraflagellar transport protein 80 homolog
  KO
K19678  intraflagellar transport protein 80
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    295106 (Ift80)
Cilium and associated proteins [BR:rno03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B2
   295106 (Ift80)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40
Other DBs
NCBI-GeneID: 295106
NCBI-ProteinID: NP_001013933
RGD: 1312006
Ensembl: ENSRNOG00000009808
UniProt: Q66HB3
Position
2:complement(155455773..155550082)
AA seq 777 aa
MRLKISLLKEPKHQELVSCVGWTTAEELYSCSDDHQIVKWNLLTSETSLIVKLPDDIYPI
DLHWFPKSLGIKKQTQAESFVLTSSDGKFHLISKLGRVEKSVEAHCGAVLAGRWNYEGTA
LVTVGEDGQVKIWSKTGMLRSTLAQQGIPVYSVAWGPDSEKVLYTAGKQLIIKPLQPNAK
VLQWKAHDGIILKVDWNSVNDLILSAGEDCKYKVWDSYGRVLYGSQPHEHPITSVAWAPD
GELFAVGSFHTLRLCDKTGWSYALEKPNTGSIFNIAWSIDGTQIAGACGNGHVVFAHVVE
QRWEWKNFQVTLTKRRTMQVRNVLNDAVDLLEFRDRVIKASLNHAHLVVSTSLQCYVFST
KNWNTPLIFDLKEGTVSLILQAERHFLLVDGGGIYLHSYEGRFISSPKFPGMRTDILNAQ
TVSLSNDTIAIKDKADEKIIFLFEASTGKPLGDGKLLSHKNEISEVALDQKGLTNDRKIA
FIDKNRDLYITSVKRFGKEEQIIKLGTMVHTLAWCDTCNILCGLQDTRFTVWYYPNAVYV
DRDILPKTLYERDASEYSKNPHIVSFVGNQVTVRRADGSLVHISISPYPAILHEYVSSSK
WEDAVRLCRFVKEQSLWACLAAMAVANRDMVTAEIAYAAVGEIDKVRYINAMKDLPSRES
KMAHILMFSGNIQEAETILLQAGLVYQAIQININLYNWERALELAVKYKTHVDTVLAYRQ
KFLETFGKQETNKRYLQYAEGLQIDWEKIKAKIEMEITKERDRSSSGQSSKNTGLKP
NT seq 2334 nt   +upstreamnt  +downstreamnt
atgagactgaagatatctctcttaaaagaaccaaagcatcaagaattagtgagctgcgtg
ggttggactactgccgaggagctgtactcatgcagtgacgatcaccagatagtgaagtgg
aacctgttaaccagtgaaaccagcctaatcgtcaagctgcctgatgacatctacccgata
gaccttcactggtttccgaagagtttaggcataaagaagcagactcaggcagaaagtttc
gtcctcacaagctctgatggtaagtttcatctgatttccaagttaggaagagtggaaaaa
agtgtagaagctcattgtggggctgtgctcgccggaagatggaattacgaagggactgca
ttagttacagttggagaagatggacaagtaaaaatctggtcaaagacggggatgcttaga
tcaactttagctcagcaaggaataccagtgtattcagtagcctggggccctgattcagaa
aaggttctttatacagcaggcaaacagctcatcattaagcctcttcaaccaaatgctaaa
gttttacagtggaaagcccatgatggaatcattttaaaagtcgactggaactcagttaat
gatcttattttatccgctggtgaagactgtaagtataaggtttgggatagttatggccgt
gtgctgtacggttcccagcctcatgagcaccctatcacctcagtggcctgggctccagat
ggggagttatttgccgtcggatcatttcatactttacgcttgtgtgataaaactgggtgg
tcatatgctttagagaaacccaacactggcagcatatttaatatcgcctggtctattgat
ggcactcagattgctggagcctgtggaaatggccatgttgtctttgcacatgtggtggag
cagcgctgggagtggaaaaattttcaagtaacgctaacgaagagaagaaccatgcaggtt
cgcaatgttctcaatgatgccgtggatttgctggagttccgggacagagtcattaaggcg
tccctgaaccacgcacacttggttgtttctacgtctctccagtgctacgtgttctctacg
aagaactggaatacaccacttatatttgatctcaaagaaggaactgttagtttaattctg
caggcagaaagacattttcttctggtggatggcggtggtatctaccttcactcttatgaa
ggccgcttcatttcttctccaaagtttcccggcatgagaacagacatcctgaacgctcag
actgtgtctctgagcaacgacacgatagcaataaaagacaaagccgatgagaagataatc
ttcctctttgaggcttcaactggaaaacccttaggggatgggaaacttctttctcataag
aatgaaatctcagaagttgctctggatcaaaaaggacttaccaatgacagaaaaattgct
ttcattgataaaaacagagatctctatatcacctcagtgaaacgatttgggaaagaagaa
cagattattaaacttggaaccatggtacatactttggcatggtgtgatacatgcaatatc
ctctgtggacttcaagatacgcgattcacagtatggtattaccctaatgctgtttatgtg
gacagagacattctgcctaaaacattgtatgaaagagatgcaagtgaatatagtaaaaac
ccacatatagtgagttttgttggaaatcaggtaactgtaagaagagctgatggctccctg
gtacacatcagcatttcaccgtaccctgctattctccatgaatatgtgagcagctcaaaa
tgggaagacgccgtaaggctctgccgctttgttaaggagcaaagcctgtgggcttgccta
gcggctatggcagttgctaatcgagatatggttactgcagaaatagcctatgcggcagtt
ggggaaatcgataaagttcggtacatcaatgctatgaaagatcttccatctagagagtca
aaaatggcccacatactaatgtttagtgggaacatccaggaggctgaaacaatacttctc
caggctggcctcgtttatcaagcaatacagatcaacattaatctctataactgggaaagg
gcactggaattggctgtaaagtacaaaacccatgttgatacagttcttgcttatcgtcaa
aagtttttggagacatttggtaaacaggaaacgaataaacgatatttgcaatacgcagaa
ggcctccaaatagactgggagaaaatcaaagcgaaaatcgagatggaaattacgaaagaa
cgagaccggtcatccagcggccagtccagcaagaatacgggcttaaagccctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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