KEGG   Rattus norvegicus (rat): 295107
Entry
295107            CDS       T01003                                 
Symbol
Smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4
  KO
K06675  structural maintenance of chromosome 4
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    295107 (Smc4)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Chromosome condensation proteins
   Condensin I
    295107 (Smc4)
   Condensin II
    295107 (Smc4)
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_21 AAA_15 AAA_23 AAA_29 ATG17_like DUF192 ABC_tran Crescentin
Other DBs
NCBI-GeneID: 295107
NCBI-ProteinID: NP_001032262
RGD: 1306680
Ensembl: ENSRNOG00000010274
Position
2:155550262..155578695
AA seq 1286 aa
MRRKGTKPSTACHQEEGPPPSEDGALSEGEKEQPDCEVDSAAAAETPGEELDSRSLEEIL
NSIPPPPPPAMASEAGAPRLMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNV
IDSMLFVFGYRAQKIRSKKLSVLIHNSDEHTDIQSCTVEVHFQKIIDKEGDDYDVLPNSN
FYVSRTAYRDNTSVYHISGKKRTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKPKG
QTEHDEGMLEYLEDIIGCGRLNEPIKVLCRRVEILNEHRGEKLNRVKMVEKEKDALEGEK
NIAIEFLTLENEIFKKKNHICQYYIYDLQNRIAEMKTQKEKIHEDTKEITEKSNVLSNEM
KAKNSAVKDIEKKLNKVTKFIEQNKEKFTQLDLEDVQVREKLKHATSKAKKLEKQLQKDK
EKVEELKSIPAKSKNVINETTTRNNSLEKEREKEEKKLKEVMDSLKQETQGLQKEKEIQE
KELMGFNKSVNEARSKMEVAQSELDIYLSRHNTAVSQLSKAKDALITASETLKERKAAIK
DINTKLPQAQQELKEKEKELQKLTQEEINLKSLVHDLFQKVEEAKSSLATNRSRGKVLDA
IIQEKKSGRIPGIYGRLGDLGAIDEKYDIAISSCCHALDYIVVDSIDTAQECVNFLKKHN
IGVATFIGLDKMAVWAQKMNKIQTPENTPRLFDLVKVKNEEIRQAFYFALRDTLVANNLD
QATRVAYQRDRRWRVVTLQGQIIEQSGTMTGGGSKVMRGRMGSSVVDEISVEEVNKMECQ
LERHSKQAAQVQEQKVQHEEAIVKLKQSEREMRNTLEKFTASIQGLSEQEEYLCVQIKEL
EANVLTTAPDKKQQKLLEENVNVFKKEYDAVAEKAGKVEAEIKRLHDTIIDINNRKLKAQ
QNKLDTINKQLDECASAITKAQVAIKTADRNLKKAQDSVCRTEKEIKDTEKEINDLKTEL
KNIEDNAEEVIKNTKDAEKSLPEIQKEHRALLQELKVIQDNEHALQKDALSIKLKLEQID
GHISEHNSKIKYWQKEISKIKLHPVEDNPVETVSVLSQEDLEAIKSPDSITNQIALLEAQ
CREMKPNLGAIAEYKKKEELYLQRVGELDKITSERDNFRQAYEDLRKQRLNEFMAGFYVI
TNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLA
LVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISDRL
IGIYKTYNITKSVAVNPKEIASKGLC
NT seq 3861 nt   +upstreamnt  +downstreamnt
atgcggcgtaagggcaccaagccctccactgcctgccaccaggaagaagggccgccgccc
tccgaggacggtgccctcagcgaaggggagaaggagcaaccggactgcgaagtggacagc
gctgcagctgcagagactccaggtgaggagcttgatagcagaagtttagaagagattttg
aatagtatccctccacccccacctccagcaatggccagtgaagctggagctcctcggctt
atgataactcatattgtaaaccaaaacttcaagtcctatgctggagagaaaattctggga
cctttccataagcgtttttcctgtattattggaccaaatggcagtggaaaatccaatgtt
attgattccatgctttttgtgtttggctatcgagcacaaaaaataaggtctaaaaagctg
tcagtactgatacataattctgatgagcacacggatattcagagttgtactgtagaagtt
cattttcaaaagataattgataaggaaggggatgattatgacgtccttcctaacagcaac
ttctatgtatctagaacagcctacagagataacacttctgtctatcatataagtgggaag
aagaggacatttaaagatgttggaaatcttcttagaagccatgggattgacttagaccat
aatcgatttttaatcttgcagggtgaagttgaacagattgctatgatgaaaccaaaaggc
cagactgaacatgatgaaggtatgcttgagtatttagaagatataattggctgtggacgg
ctaaatgaacctattaaagtcttgtgtcgaagagttgaaatattaaatgaacacagagga
gaaaagttaaacagagtaaaaatggtagaaaaggagaaggatgcactagaaggagagaaa
aacatagccattgagttccttaccctggaaaatgaaatatttaagaagaagaatcatatc
tgtcagtactacatctatgatctacaaaatagaattgctgaaatgaagactcaaaaggaa
aaaattcatgaagacactaaagaaatcactgagaagagcaatgtgctttccaatgaaatg
aaagctaagaattcagctgtaaaggatatagaaaagaagctcaataaagttacaaaattt
attgaacaaaataaagaaaaatttacacagctagatttggaagatgttcaagttagggaa
aaattaaaacatgctacaagtaaagccaaaaaactggagaaacaacttcaaaaagataaa
gaaaaggttgaagagctgaaaagtatacctgccaagagtaagaatgtcataaatgagaca
acaactaggaacaattctcttgagaaagaaagagagaaagaagaaaaaaaattaaaagag
gttatggacagccttaaacaggaaacacaggggctccagaaagaaaaggagattcaagaa
aaggaacttatgggctttaacaagtcagtaaatgaagcacgttcaaagatggaagtcgct
cagtcagaacttgatatctatctcagtcgacataacacagcagtgtctcaattaagtaag
gcgaaggacgcgttaatcacagcttctgagactctcaaggaaaggaaagctgcaatcaag
gacataaacacaaagctccctcaggctcaacaagaattaaaggagaaagaaaaagaactt
cagaaactgacacaagaagaaataaacttgaaaagtttggttcatgatcttttccaaaaa
gttgaagaagcaaagagttccttagcaacaaatcgaagtagaggaaaagtacttgatgca
ataattcaagaaaaaaagtcaggcaggatcccaggaatatatggaagattgggagactta
ggagctattgatgaaaaatatgacattgctatttcatcctgttgccatgcattagactac
attgttgttgattctattgatacagcccaagaatgtgtaaacttccttaaaaaacataat
attggagttgcaacttttataggtttggataagatggcagtgtgggcccaaaaaatgaac
aaaattcaaactcctgaaaatactcctcggttatttgatttggttaaagtaaaaaatgag
gaaatccgccaagctttttactttgctttacgagataccttggtggctaacaatttggat
caagctacaagagtagcatatcaaagagatagacgatggagagtagtaacgctacagggc
caaatcatagaacagtcgggtacaatgactggtggcggaagcaaagtgatgagaggaaga
atgggttcttcagttgttgatgaaatctctgtagaagaggtaaataagatggaatgccag
ttggaaaggcattctaaacaagcagcacaagtccaggaacagaaagtacaacatgaagaa
gccatagttaagttaaagcagagcgaacgagaaatgagaaatacactagaaaagttcact
gcaagcatccagggtttatcagaacaagaagagtatttgtgtgtacaaattaaagaacta
gaagctaatgtgcttactacagcccctgataaaaagcagcagaaactgcttgaagaaaat
gtcaatgttttcaaaaaagaatatgatgctgtggctgagaaagctggtaaggttgaagct
gagattaaacggctacatgataccatcatagatatcaacaatcgaaaactcaaagcccaa
caaaacaaacttgacacaataaataagcagctggatgaatgtgcttctgctattaccaaa
gcccaagtggcgatcaagactgctgacagaaatcttaaaaaggcacaggattctgtttgc
cgtacagagaaagaaataaaagacactgaaaaggaaataaatgacttaaaaacagaacta
aaaaatattgaagacaatgccgaagaagtcataaaaaatacaaaagatgcagagaagtcc
ttaccagaaatccagaaagaacatcgtgctctccttcaggagctaaaagttattcaagat
aatgagcatgcgctccagaaagatgcacttagtattaagttgaaacttgagcagatagat
ggccacatttctgaacataactcaaaaataaaatactggcaaaaagagatttcaaaaata
aaattacatcctgtcgaagataaccctgttgagacagtatcagtgctaagccaagaggat
cttgaggcaatcaagagtccagattctataacaaatcaaattgcacttttggaagctcag
tgtcgtgaaatgaaaccaaaccttggtgccattgctgagtataaaaaaaaggaagaatta
tatttgcaaagagtaggcgaactggacaaaattacttctgaaagagataattttagacaa
gcatatgaagatcttcgaaaacaaaggctgaatgaatttatggctggtttttatgtaata
acaaataaactaaaagaaaactaccaaatgctcactttgggaggggatgctgaactggag
cttgtggatagtttagatcctttttctgaaggaatcatgttcagtgttcgaccacctaag
aaaagttggaagaagatctttaacctttcaggaggcgagaaaacccttagctcattggcc
ttggtgtttgcccttcaccactacaaacccactcccctgtacttcatggatgagattgat
gccgctctggattttaaaaacgtgtctattgttgcattctatatatacgagcaaacaaaa
aatgcacagttcataataatctctcttcgaaataatatgtttgagatttcagatagactt
attggcatctataaaacatataatattacaaaaagtgttgcagtgaacccaaaagaaatt
gcatctaaaggactctgttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (17)   
   RefSeq(nuc) (1)   
   GenBank (8)   
   EMBL (8)   
Protein domain (10)   
   Pfam (10)   
All databases (37)   

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