KEGG   Rattus norvegicus (rat): 29512
Entry
29512             CDS       T01003                                 
Symbol
Padi4
Name
(RefSeq) protein-arginine deiminase type-4
  KO
K24669  protein-arginine deiminase 4 [EC:3.5.3.15]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04613  Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    29512 (Padi4)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.3  In linear amidines
    3.5.3.15  protein-arginine deiminase
     29512 (Padi4)
SSDB
Motif
Pfam: PAD PAD_M PAD_N
Other DBs
NCBI-GeneID: 29512
NCBI-ProteinID: NP_058923
RGD: 3290
Ensembl: ENSRNOG00000006855
UniProt: O88807 A6ITP3
Position
5:complement(158324417..158357466)
AA seq 666 aa
MAQGAVIHVAPEEPTHAVCVVGTATPLDIRGSAPRGSTSFSITASPEVVVDVIHGPPSKK
STTGASKWPLDPKLEVTLQMKAASSRIDDQKVRISYYGPKTSSTQALLYLTGVELSLSAD
VTRTGKAKPAPAGKDQSTWTWGPDGHGAILLVNCDKEDPKSSGMDFEDDKVLDNKDLQDM
SPMTLSTKTPKDFFDKYQLVLQVPKAKMNKVRVFRATRGKLPSRYKVVLGPQQFSHRLEL
LGGQHSTDFYVEGLAFPDADFKGLIPLTISLLDKSNPELPEALVFQDTVMFRVAPWIMTP
NTQPPQEVYVCRFSDNEDFLKSLATFTKKAKCKLTVCPEEENQDDQWMQDEMEIGYIQAP
HKTLPVVFDSPRDRGLKDFPVKRVMGPNFGYVTRGLYRAEVTGLDAFGNLEVSPPVTVRG
KEYPLGRILIGSSGYSSSESRDMHQILQDFLGAQQVQAPVRLFSDWLFVGHVDEFLSFVP
ARGKQGFRLLLSSPRACYQMFQELQTEGHGEASLFEGLKRKRQTISDILSSQKLRDQNAY
VESCIDWNREVLKRELGLTEGDIIDIPQLFRIVGNSRGNPKAEAFFPNMVNMLVLGKHLG
IPKPFGPIINGRCCLEEKVCSLLEPLGLHCTFINDFYSYHMYHGEVHCGTNVRRKPFAFK
WWHMVP
NT seq 2001 nt   +upstreamnt  +downstreamnt
atggcccagggtgcggtgatccatgtggcccctgaggagcccacccatgccgtgtgtgtg
gtgggcacggcgaccccgctggatatccgtggctctgctccaaggggctccacgtccttc
agcatcacagcctccccagaagttgttgtagatgtcatccatggtcctccatccaagaag
agtaccacgggggcctccaaatggcctctggaccccaagctggaggtgaccctacagatg
aaagcagccagcagtaggatagatgaccagaaggttcgaatttcctattacggacccaag
acctcatcaacccaagccctgctctacctcaccggggtggaactctccctgagtgcggat
gtcacccgcactggcaaagcgaagccagccccagctgggaaggatcagagcacctggacc
tggggcccggacggtcacggcgccatcctgttggtgaactgtgacaaggaggatcccaag
tcctccggaatggacttcgaggacgacaaggtcttagacaacaaagacctgcaggacatg
tcaccaatgaccctaagcacgaagactcccaaagacttctttgacaagtatcagttggtg
ctgcaggtgccgaaggccaagatgaacaaagtgagagtcttccgggccacacggggcaaa
ctgccatccagatacaaggtggtcctaggaccacagcagttctcccaccgcctagagctg
ctgggcggccagcacagcacggacttctatgtggaaggccttgctttccctgacgccgac
ttcaaggggctcattcccctaacgatctccctgttggacaaatctaacccggagctccct
gaagccctggtgttccaagacaccgtgatgttccgtgtggccccctggatcatgacgccc
aacactcagcccccccaggaggtatacgtgtgcaggttttccgacaatgaagacttccta
aagtcactggctactttcaccaagaaagccaagtgcaaactgactgtgtgcccagaggag
gaaaatcaagatgaccagtggatgcaggatgaaatggagattggctacatacaggccccc
cacaagacgctgcctgtggtctttgactccccgagggacagaggcctgaaggatttccct
gtcaaacgagtcatgggtccaaattttggctatgtgacccgagggctctatagagcagag
gtcactgggctggatgcctttgggaacctggaggtgagtcccccagtcactgtcagaggg
aaggaatacccactgggcaggattctcatcgggagcagcggttattccagcagtgagagc
cgggacatgcaccagatcctgcaggacttcctgggtgcccagcaggtgcaggcccctgtg
agactcttctccgattggctctttgtgggtcacgtggatgagttcttgagcttcgtcccg
gcacggggcaagcagggctttcggctgctactgtccagccccagagcttgctaccagatg
ttccaggagctgcagaccgagggccacggggaggcatcactgttcgaaggactcaagagg
aaaaggcagacaatcagtgacattctgtccagccagaaactaagagaccagaatgcctac
gtggagagctgtattgactggaaccgtgaggtgctgaagcgagagttgggcctgacggag
ggcgacatcattgatataccccagctcttcaggattgtgggaaactccagagggaacccg
aaggctgaggccttcttcccaaacatggtgaacatgctggtactgggcaagcacctgggc
atccccaagccctttgggcccatcatcaacggccgctgctgcctggaggagaaggtgtgc
tccctgctggagccgctgggtctgcactgcaccttcatcaacgacttctacagctatcac
atgtaccacggagaggttcactgtggcaccaacgtgcgcaggaagcccttcgccttcaag
tggtggcacatggttccctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

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