KEGG   Rattus norvegicus (rat): 29515
Entry
29515             CDS       T01003                                 
Symbol
Atn1
Name
(RefSeq) atrophin-1
  KO
K05626  atrophin-1 (dentatorubral-pallidoluysian atrophy protein)
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09190 Not Included in Pathway or Brite
  09193 Unclassified: signaling and cellular processes
   99995 Signaling proteins
    29515 (Atn1)
SSDB
Motif
Pfam: Atrophin-1
Other DBs
NCBI-GeneID: 29515
NCBI-ProteinID: NP_001381275
RGD: 61832
Ensembl: ENSRNOG00000060594
Position
4:complement(159240573..159254378)
AA seq 1184 aa
MKTRQNKDSMSMRSGRKKEAPGPREELRSRGRASPGGVSTSSSDGKAEKSRQTAKKARVE
ETSTPKANKQGRSEEISESESEETSAPKKTKTEELPRPQSPSDLDSLDGRSINDDGSSDP
RDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQGPARPYHPPPLFPPSPPPPDSIPRQPES
GFEPHPSVPPTGYHAPMEPPTSRLFQGPPPGAPPPHPQLYPGSAGGGVLSGPPMGPKGGA
AASSVGPPSGGKQHPPPTTPIPISSSGASGAPPAKPPNTPVGAGNLPSAPPPATFPHVTP
NLPPPPALRPLNNASASPPGMGAQPIPGHLPSPHAMGQGMSGLPPGPEKGPTLAPSPHPL
PPASSSAPGPPMRYPYSSCSSSSVAASSSSSAATSQYPASQTLPSYPHSFPPPTSMSVSN
QPPKYTQPSLPSQAVWSQGPPPPPPYGRLLPNNNTHPGPFPPTGGQSTAHPPAPAHHHHQ
QQQQPQPQPQPQPQQHHHGNSGPPPPGAYPHPLESSNSHHAHPYNMSPSLGSLRPYPPGP
AHLPPSHGQVSYSQAGPNGPPVSSSSNSSGSSSQAAYSCSHPSSSQGPQGASYPFPPVPP
ITTSSATLSTVIATVASSPAGYKTASPPGPPQYSKRAPSPGSYKTATPPGYKPGSPPSFR
TGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSSLSSLPPPPAAPTTGPPLTATQI
KQEPAEEYETPESPVPPARSPSPPPKVVDVPSHASQSARFNKHLDRGFNSCARSDLYFVP
LEGSKLAKKRADLVEKVRREAEQRAREEKEREREREREKEREREKERELERSVKLAQEGR
APVECPSLGPVPHRPPFEPGSAVATVPPYLGPDTPALRTLSEYARPHVMSPGNRNHPFYV
PLGAVDPGLLGYNVPALYSSDPAAREREREARERDLRDRLKPGFEVKPSELEPLHGVPGP
GLDPFPRHGGLALQPGPPGLHPFPFHPSLGPLERERLALAAGPALRPDMSYAERLAAERQ
HAERVAALGNDPLARLQMLNVTPHHHQHSHIHSHLHLHQQDAIHAASASVHPLIDPLASG
SHLTRIPYPAGTLPNPLLPHPLHENEVLRHQLFAAPYRDLPASLSAPMSAAHQLQAMHAQ
SAELQRLALEQQQWLHAHHPLHSVPLPAQEDYYSHLKKESDKPL
NT seq 3555 nt   +upstreamnt  +downstreamnt
atgaagacacgacagaataaagactcgatgtcaatgaggagtggacggaagaaagaggcc
cccgggccccgggaagagctgagatcgaggggccgggcctcccctggaggggtcagcacg
tccagcagtgatggcaaagccgagaaatccaggcagacagccaagaaggcccgagtagag
gagacctctaccccaaaagccaacaagcagggccggagcgaggagatctcagagagtgaa
agcgaagagaccagtgcgcccaaaaagaccaagaccgaggagcttccgcgcccacagtct
ccctcggatctggacagcttagatggccgcagcatcaacgatgacggcagcagtgaccct
agagatatagaccaggacaaccgaagcacatcccccagcatctacagccctggcagtgtg
gaaaatgactcggattcatcctctggcctgtcccagggcccggctcgcccctaccaccca
cctccactctttcctccttcccctccaccaccagacagcattccccgacagccagagtct
ggctttgaaccgcacccttctgtgccgcctactggatatcatgctccaatggagcccccc
acatctcggttattccagggcccacctcctggagctcctcccccacacccacagctctac
cctgggagtgctggtggaggtgttttatctggaccccccatgggtcccaaagggggagca
gccgcctcctcagtgggtccccctagtgggggcaagcagcaccccccacccactacccca
attccaatatcaagctctggggccagtggcgctcctccagcaaagccccccaatactcca
gtgggtgctgggaacttaccttctgctccaccaccagctactttcccccacgtgacacca
aacctgcctcctccacctgccctgagacccctcaacaatgcctcagcctctcctcctggc
atgggggctcagccaatccctgggcatctgccctctccccatgccatggggcagggtatg
agtggacttcctcctggcccagagaagggcccaaccctggccccctctccccacccttta
cccccggcttcttcctccgctcctgggcccccaatgcggtacccgtattcatcctgctcc
agtagctctgttgcagcgtcttctagttcctccgccgccacctcccagtacccagcttcc
cagaccctgcccagttaccctcactccttccccccaccaacaagtatgtctgtctctaat
cagccacccaagtacacccagccttctctcccatcccaggctgtgtggagccagggccca
cctcctcctcctccttatggccgcctcttgcccaacaacaacactcatccgggccctttc
cctcctaccgggggtcaatccacagcccacccgccagcccctgcacatcaccatcaccag
cagcagcagcagccacagccacagccacagccacagccgcaacaacatcatcatggaaac
tctgggccccctccacctggggcatatcctcaccccctagagagcagtaactcccaccat
gcacacccttacaacatgtcaccctccctggggtctttgaggccctacccaccagggcca
gcacacctgcctccgtctcatggccaggtgtcttatagccaagcaggtcccaatggtccc
ccggtttcttcttcttccaactcttccgggtcttcgtctcaagccgcctattcatgctca
cacccttcttcatcccagggcccccaaggggcatcctaccccttcccaccagttcctcca
atcaccacctcctcagctactctttccactgtcatcgccaccgtggcttcctcgccagca
ggttataagacagcctcaccacctggcccccctcagtacagcaagagagccccatcccca
gggtcctacaagacagccaccccgcctggatacaagccagggtcaccaccgtccttcaga
acagggaccccacctggctatcgaggcacctctccgccagcaggcccagggaccttcaag
ccaggttcacccaccgtggggccggggcccctaccacccgcggggccttcaagtttgtca
tctctgcctccaccacccgcggccccgactacagggccgcccctgactgccacgcagatc
aaacaggaaccagctgaagagtatgaaacccccgagagtccggtgcctccggctcgcagc
ccctcgccccctcctaaggtggtggacgtgcctagccatgccagccagtcagccaggttc
aataagcacctggaccgtggcttcaactcgtgcgcgcgcagcgacctgtactttgtgccg
ctggagggatccaagctggccaagaagcgcgcggacctggtggagaaagtgcggcgcgag
gccgagcagcgcgcgcgcgaagaaaaagagcgcgagcgcgagcgggaacgtgagaaggag
cgcgagcgcgagaaagagcgcgagctggagcgcagtgtgaaattggcccaggagggccgt
gctccagtggagtgcccgtccctgggtccagtgccccatcggcctccctttgaacctggc
agcgctgtggctaccgtgcccccttacctgggtcctgatactccagccctgcgcactctc
agtgaatacgcccgacctcatgtcatgtctcctggcaatcgcaaccacccattctatgtg
cccttgggggcagtggacccggggcttctgggttacaatgtcccagccctgtacagcagc
gacccagctgcccgagaacgggagcgggaagcccgtgaacgtgacctccgtgaccggctc
aagcctggctttgaggtgaaacctagtgagctggaacccctacatggggtccccgggcca
ggcctggatcccttcccccgacacgggggcctggctctacaacctgggccacctggcctg
catcctttcccttttcatccgagcctggggcccctggaacgagaacggctagcgctggca
gctgggccagccctgcgtcctgacatgtcttatgctgagcggttggcagctgaaaggcag
catgcagaaagggtggcagccctgggcaatgacccactagcccggctgcagatgctcaac
gtgactccccatcatcaccagcactcccacatccactctcacctacacctgcaccagcag
gatgccatccatgcggcctccgcctcggtgcaccctctcattgaccccctggcctcaggg
tctcaccttacccggatcccctacccagctgggaccctccctaatccccttcttcctcac
cctctgcacgagaacgaagttcttcgtcaccagctctttgctgccccttaccgggaccta
ccggcctctctatctgcgccaatgtcagccgcccatcagctgcaggccatgcacgcacag
tcagccgagctgcagcgcttggcactggaacagcaacagtggctgcacgctcatcaccca
ttgcacagcgtgccgctgcctgcccaggaggactactacagtcacctgaagaaggagagt
gacaagccgctgtag

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (10)   
   RefSeq(nuc) (2)   
   GenBank (4)   
   EMBL (4)   
Protein domain (1)   
   Pfam (1)   
All databases (23)   

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