KEGG   Rattus norvegicus (rat): 295365
Entry
295365            CDS       T01003                                 
Symbol
Amigo1
Name
(RefSeq) amphoterin-induced protein 1 precursor
  KO
K22529  amphoterin-induced protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09190 Not Included in Pathway or Brite
  09193 Unclassified: signaling and cellular processes
   99992 Structural proteins
    295365 (Amigo1)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_1 I-set Ig_3 ig Ig_2 LRR_5 LRR_9 V-set Sp38 Ig_6 Invasin_D3
Other DBs
NCBI-GeneID: 295365
NCBI-ProteinID: NP_001399480
RGD: 1303079
Ensembl: ENSRNOG00000045665
Position
2:198511285..198516744
AA seq 493 aa
MQPQRDLRGLWLLLLSLFLLLFEVARAGRPVVSCPANCLCASNILSCSKQQLPNVPQSLP
GYTALLDLSHNNLSRLKAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN
HLHTLDEFLFSGLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNMISRFPLELIKD
ANRLPKLTLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCKLYQLFSHWQYRQ
LSSVMDFQEDLYCVHSKKLHNVFSLDFFNCSEYKESAWEAHLGDTLTITCDTKQQGMTKV
WVTPSNEQVLNQGANGTVTVSEDGNLHFKEVQVEDGGVYTCYAMGETFNETLSVELKVYN
FTLHGHHDTLNTAYTTLVGCILSVVLVLIYLYLTPCRCWCRGVEKPSSHQGDSLSSSMLS
TTPNHDPMAGGDKDDGFDRRVAFLEPAGPGQGQNGKLKPGNTLPVPEATGKGQRRMSDPE
SVSSVFSDTPIVV
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgcaaccccagcgtgacctgcgaggcctctggctcctgctgctctccttgttcctgctt
ctctttgaggtagctagggcaggccgacctgtggtcagttgtcccgccaattgcctgtgc
gccagcaacatcctcagctgctccaagcagcagctacccaatgtgccccaatctttgccg
ggctacacagcgctactggacctcagccacaacaacttgagccggctgaaggctgagtgg
acccccacccgtctgaccaacctgcactccctgctgctgagccacaaccacctgaacttc
atctcctctgaggccttcgtcccggtacccaaccttcggtacctggacctctcctccaac
catcttcacacgctggatgagttcctgttcagcggcctgcaggcactggaagtgctgctg
ctctacaataaccacattgtggtggtggaccggaatgccttcgaggacatggcccagctg
cagaaactctacctaagccagaatatgatctctcgctttcctctggaactgatcaaggat
gcaaacagattacccaaactaacgctcttggatctgtcctccaacaagctgaagaagttg
cccctgactgacctgcagaaattgccagcctgggtcaagaatgggctgtacctgcataac
aaccccctggagtgtgactgcaagctctaccagctcttttcacactggcagtaccggcag
ctgagttctgtgatggacttccaggaggatctgtattgcgtgcactccaagaagctgcat
aacgtcttcagtctggatttcttcaattgcagcgagtacaaggaaagtgcctgggaggct
cacctgggagacaccttgaccatcacgtgcgataccaaacagcaagggatgaccaaagtg
tgggtgaccccaagcaatgagcaggtgctaaaccagggggccaatggcacggtgaccgtg
tccgaggatggcaaccttcattttaaagaggtgcaggttgaggatgggggtgtgtatacc
tgctatgccatgggggagactttcaacgaaacactgtctgtggagttgaaagtgtataac
ttcaccttgcacggacaccatgacaccctcaacacagcctatactaccctggtgggctgc
atcctcagtgtggttctggtcctcatatacttgtacctcacaccttgccgctgctggtgc
cggggtgtggagaagccttccagccatcaaggagatagcctcagctcttctatgctcagt
accacacccaaccatgaccctatggctggtggggacaaagatgatggttttgaccggcgg
gtggccttcctggaacctgctggaccagggcagggtcaaaatggcaaactcaagccaggc
aacactctgccggtgcccgaggcaacaggcaagggccaacggaggatgtcagatccagag
tcggtcagctcggtcttttctgatacacccattgtggtgtga

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Ontology (1)   
   KEGG BRITE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (13)   
   Pfam (13)   
All databases (36)   

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