KEGG T01003: 295541

Rattus norvegicus (rat): 295541

Entry

295541            CDS       T01003

Symbol

Msh4

Name

(RefSeq) mutS protein homolog 4

K08740

DNA mismatch repair protein MSH4

Organism

rno Rattus norvegicus (rat)

Brite

KEGG Orthology (KO) [BR:rno00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    295541 (Msh4)
Chromosome and associated proteins [BR:rno03036]
Eukaryotic type
  Meiosis-specific proteins
   Others
    295541 (Msh4)

SSDB

Motif

Pfam:

MutS_V MutS_III MutS_II MutS_IV AAA_14 AAA_23 AAA_21 Rad17 AAA_29 ATPase_2 nSTAND3 AAA_30

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

RGD:

Ensembl:

Position

2:complement(245445118..245504493)

AA seq 911 aa
MLRQEATSLSSSPRWTPSRREVPRRRTPASASRPSTEGAVADRSSSSSSSSPAPAAAPGS
SFGNKRSYTTHKAASNFPVGTSSSSAQDTTYPHTFRTPLSAGNPQRSYKGWTPQVGLSAT
SSAVSAHAPSVIVAVVEGRGLARGEIGMASIDLKSPQIMLSQFADNTTYAKVITKLQVLS
PLEIIMSNTACVVGNSTKLFTLITENFKNVNFTTVQRKYFNETKGLEYIEQLCIAEFSSV
LMEVQSRYYCLAAAAALLKYVEFIQNSVYAPKSLKIYFQGSEQTAMIDSSSAQNLELLVN
NQDYRSNHTLFGVLNYTKTAGGSRRLRSNILEPLVDVETISMRLDCVQELLQDEELFYGL
QSVISRFLDTEQLLSVLVQIPKQDTVNAAESKITNLIYLKHTLELVDPLKVALKNCSTPL
LRAYYGSLEDHRFGLILEKIKTVINDDARYMKGCLNMRTQKCYAVRSNISEFLDIARRTY
TEIVDDIAGMISQLAEKYSLPLRTSFSSARGFFIQMTTDCAALSSDQLPSEFIKISKVKN
SYSFTSADLIKMNERCQESLREIYHMTYMIVCKLLSEIYEHIHCLYKLSDTVSMLDMLLS
FAHACTLSDYVRPEFTDTLAIKQGWHPILEKISAEKPVANNTYITEGSNVLIITGPNMSG
KSTFLKQIALCQIMAQIGSFVPAQYASFRIAAQIFTRISTDDDIETNSSTFMKEMKEIAY
ILHNANDKSLILIDELGRGTNTEEGTGISYAVCEHLLSTKAFTLFTTHFLELCHIDTLYL
NVENMHFEVQHVKNTSRNKDAILYTYKLSRGLTEEKHYGLKAAEASSLPPSIVLDAREIT
TQITRQISQNRRSSPEMDRQRAVYHLATRLVQVARNSQLEPDRLRTYLSNLKKKYEGDFP
RAADLPEKTEE

NT seq 2736 nt +upstreamnt +downstreamnt
atgctgaggcaggaggctacttcgctctcgagttccccacggtggacgccatcccggagg
gaggtcccccgccggaggacgccggcctccgcgtccaggccgagcacagaaggtgccgtg
gccgacaggagcagcagcagcagcagcagcagcccggcgccggcggccgctccaggttca
tcatttggaaacaaaagatcttacactacacacaaagctgcatccaattttcctgttggt
acgagctcgtcttctgcacaagataccacgtatccacatacgtttagaactccgttatct
gctggaaatccccagagatcatataaaggttggacaccacaagtaggactttcagccaca
tcctccgcggtgtctgcacatgccccgtcagtcattgtagcagtggtggaaggaagaggg
ctggctagaggcgagataggaatggcaagcatcgatttaaaaagcccacagattatgttg
tcacagtttgcagacaacacaacatatgcaaaggtgatcactaaactccaagttttatca
cctttagaaataataatgtcaaatactgcttgtgttgtgggaaattcaaccaagttattt
actctgatcacagaaaattttaagaacgttaatttcactacagtccaaaggaaatacttc
aacgaaacaaagggcttagagtacattgaacagttgtgcatagctgagttcagctctgtc
ctaatggaggttcagtccaggtattactgccttgcagctgccgcagccttattaaaatat
gttgaatttattcaaaattcagtgtatgcacccaaatcgctaaagatttatttccaaggt
agtgagcagacagccatgatagattcatcatcagcccaaaacctggagctgttagttaat
aaccaggactacaggagtaatcacactctctttggtgttttaaattacaccaagactgca
ggagggagcagaaggctgcgctccaacatcctggagccgctggttgatgtggaaacaatc
agcatgaggctggactgtgtccaggagctgcttcaggacgaggagctcttctatggactc
cagtcagtcatatcaagattcctggacacagagcagctgctttctgttttggttcagatt
ccaaagcaagacacggttaatgcagctgaatcaaagataacaaacttgatttatctgaag
cacacattggaacttgtggatcctttaaaggttgctttaaagaactgtagcacgccttta
ctaagagcttactatggctccttggaagaccataggtttgggctaatacttgagaagatt
aaaacagtgataaatgatgatgcaaggtacatgaagggctgcctgaacatgcggactcag
aagtgctatgcagtgcgctccaacatcagtgagttcctggacatagccaggaggacatac
acagagatagtggacgacatagcaggaatgatatcacagctcgcagagaagtacagtctt
cccttacggaccagcttcagctccgcgagggggtttttcatccagatgaccacagactgc
gctgcgctctccagtgaccagcttccttcagagtttattaagatttctaaagtgaaaaac
tcatatagctttacatcagcagatttaattaaaatgaatgaaagatgccaagagtctttg
cgagaaatctatcacatgacctacatgatagtgtgcaagctgctcagtgagatctacgag
cacatccattgcttgtacaagctctcggacacagtgtcaatgctggacatgctgctgtcg
tttgctcatgcctgcactctctctgactacgttcgaccagagtttactgacactttagcc
atcaaacaaggatggcatcccattcttgaaaaaatatctgcagagaaacctgttgcaaac
aatacatatatcacagaagggagtaacgttctgatcatcactggaccaaatatgagtgga
aagtccacgttcttaaagcagattgctctttgtcagatcatggcccagatcggctccttc
gtcccagcacagtacgcctccttcaggattgctgcgcagatctttacgagaatcagcact
gatgatgatattgaaacaaactcttcaacatttatgaaagaaatgaaagagatagcatat
attcttcacaatgctaacgacaagtcactcatactgattgatgagcttggcagaggcact
aatacagaagaagggactggtatttcttatgctgtctgtgagcatctgctgagcacaaag
gcatttacactcttcactacccatttcctggaactgtgccatatagacaccctgtatctt
aatgtagaaaacatgcattttgaagttcagcatgtgaagaatacctcaagaaataaggat
gcaattttgtatacttacaaactttccaggggactcacagaagaaaaacactatggatta
aaagctgcagaagcctcctcacttccaccatcaattgtcttggatgccagagagatcaca
acacaaattacaaggcaaatctcgcaaaaccgaaggagttcccctgagatggatagacag
agagctgtgtaccatctggctacaaggcttgtccaggtcgctcgaaactctcagttggag
ccggacaggctgcggacatatctgagtaatctcaagaagaagtatgaaggggactttccc
agggctgcggaccttccagagaagactgaggagtga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (12)   
   Pfam (12)   
All databases (32)   

Download RDF

DBGET integrated database retrieval system