KEGG   Rattus norvegicus (rat): 29561
Entry
29561             CDS       T01003                                 
Symbol
Lsamp
Name
(RefSeq) limbic system-associated membrane protein isoform 2 precursor
  KO
K06772  limbic system-associated membrane protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    29561 (Lsamp)
Cell adhesion molecules [BR:rno04515]
 Immunoglobulin superfamily
  IgLON family
   29561 (Lsamp)
SSDB
Motif
Pfam: I-set Ig_3 ig Ig_2 V-set Ig_5 Izumo-Ig V-set_CD47 C2-set_2 Ig_6 Ig_C17orf99 Sp38
Other DBs
NCBI-GeneID: 29561
NCBI-ProteinID: NP_058938
RGD: 71102
Ensembl: ENSRNOG00000031852
UniProt: Q62813 A6IR42
Position
11:complement(72053285..74223019)
AA seq 338 aa
MVGRVQPDRKQLPLVLLRLLCLLPTGLPVRSVDFNRGTDNITVRQGDTAILRCVVEDKNS
KVAWLNRSGIIFAGHDKWSLDPRVELEKRHALEYSLRIQKVDVYDEGSYTCSVQTQHEPK
TSQVYLIVQVPPKISNISSDVTVNEGSNVTLVCMANGRPEPVITWRHLTPLGREFEGEEE
YLEILGITREQSGKYECKAANEVSSADVKQVKVTVNYPPTITESKSNEATTGRQASLKCE
ASAVPAPDFEWYRDDTRINSANGLEIKSTEGQSSLTVTNVTEEHYGNYTCVAANKLGVTN
ASLVLFRPGSVRGINGSISLAVPLWLLAASLFCLLSKC
NT seq 1017 nt   +upstreamnt  +downstreamnt
atggtcgggagagttcaacctgatcggaaacagttgccgctggtcctactgagactgctc
tgccttcttcccacaggactgcccgttcgcagcgtggattttaaccgaggcacggacaac
atcaccgtgaggcagggggacacggccatcctcaggtgtgtggtagaagacaagaactcg
aaagtggcctggttgaaccgctctggcatcatcttcgctggacacgacaagtggtctctg
gaccctcgggttgagctggagaaacgccatgctctggaatacagcctccgaatccagaag
gtggatgtctatgatgaaggatcctacacatgctcagttcagacacagcatgagcccaag
acctctcaagtttacttgattgtacaagttccaccaaagatctccaacatctcctcggat
gtcactgtgaatgagggcagcaatgtaaccctggtctgcatggccaatgggcgccctgaa
cctgttatcacctggagacaccttacaccacttggaagagaatttgaaggagaagaagaa
tatctggagatcctaggcatcaccagggaacagtcaggcaaatatgagtgcaaggctgcc
aacgaggtctcctccgcggatgtcaaacaagtcaaggtcactgtgaactatccacccacc
atcacagagtctaagagcaatgaagccaccacaggacgacaagcttccctcaaatgtgaa
gcctcagcggtgcctgcacctgactttgagtggtaccgggatgacaccaggataaacagt
gcaaacggccttgagattaagagcactgagggccagtcctccctgacggtgaccaacgtc
actgaggaacactacggcaactatacctgtgtggctgccaacaagctcggcgtcaccaat
gccagcctagtccttttcagacccgggtcggtgagaggaatcaacggatccatcagtctg
gccgtaccactgtggctgctggcagcgtccctgttctgccttctcagcaaatgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (11)   
   RefSeq(nuc) (3)   
   GenBank (4)   
   EMBL (4)   
Protein domain (12)   
   Pfam (12)   
All databases (38)   

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