KEGG   Rattus norvegicus (rat): 29564
Entry
29564             CDS       T01003                                 
Symbol
Dync1i1
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1
  KO
K10415  dynein cytoplasmic 1 intermediate chain
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04145  Phagosome
rno04814  Motor proteins
rno04962  Vasopressin-regulated water reabsorption
rno05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    29564 (Dync1i1)
  09142 Cell motility
   04814 Motor proteins
    29564 (Dync1i1)
 09150 Organismal Systems
  09155 Excretory system
   04962 Vasopressin-regulated water reabsorption
    29564 (Dync1i1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    29564 (Dync1i1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    29564 (Dync1i1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    29564 (Dync1i1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   SAC (spindle assembly checkpoint) factors
    Motor proteins
     Dynein complex
      29564 (Dync1i1)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dyneins
     29564 (Dync1i1)
SSDB
Motif
Pfam: WD40 Dynein_IC2
Other DBs
NCBI-GeneID: 29564
NCBI-ProteinID: NP_062107
RGD: 2512
Ensembl: ENSRNOG00000009700
UniProt: Q63100 G3V792
Position
4:34819313..35132647
AA seq 643 aa
MSDKSDLKAELERKKQRLAQIREEKKRKEEERKKKEADMQQKKEPVPDDSDLDRKRRETE
ALLQSIGISPEPPLVQPLHFLTWDTCYFHYLVPTPMSPSSKSVSTPSEAGSQDDLGPLTR
TLQWDTDPSVLQLQSDSELGRRLNKLGVSKVTQVDFLPREVVSYSKETQTPLATHQSEED
EEDEEMVEPKVGHDSELENQDKKQETKEAPPRELTEEEKQQILHSEEFLIFFDRTIRVIE
RALAEDSDIFFDYSGRELEEKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDWSLQYPEL
MVASYSNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYS
GQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDM
LSTPQESMELVYNKSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGEVFEG
HQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNADYVYDVMWSP
VHPALFACVDGMGRLDLWNLNSDTEVPTASVAIEGASALNRVRWAQGGKEVAVGDSEGRI
WIYDVGELAVPHNDEWTRFARTLVEIRANRADSEEEGAVELAA
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgtctgacaagagcgacctaaaagctgagctggagcgcaaaaagcagcgcttagcgcag
ataagagaggagaagaaacggaaggaagaggagaggaaaaagaaagaggcagatatgcag
cagaagaaagagcccgttccagatgactccgatctggaccgcaaacgacgagagacagaa
gctttgcttcagagcatcggcatatcgccggagccccctctagtgcagccgctgcatttt
ttaacatgggatacctgttattttcattatttagtcccaacccctatgtctccctcttcg
aaatcagtgagcactcccagtgaagctggaagccaagacgatctggggccattaacaagg
accctgcagtgggacacagacccctcagtgctccagctgcagtcagactcagaacttggg
agaagactgaacaagctgggcgtgtcaaaggttacccaggtggatttcctgcctagggag
gtggtatcctactccaaggagacacagactcctcttgcaactcatcagtcagaagaggat
gaggaagatgaggagatggttgagcccaaagttggtcatgattctgaactggaaaatcaa
gacaaaaagcaggagacaaaggaagcccctccaagagagctgacggaagaagaaaaacag
cagatcctgcactcagaggaattcctcatcttctttgaccgaacgatccgagtgattgaa
cgagctctggctgaggactctgacatcttttttgactacagcggccgagagctggaggag
aaagatggggatgtacaggctggagccaacctttctttcaaccgtcagttctatgatgag
cattggtctaagcaccgggtggtcacatgtatggactggtctctccagtaccctgagctg
atggttgcttcttatagcaacaatgaagatgctccccatgaaccagatggagtggccttg
gtttggaacatgaagttcaagaaaaccacaccagaatatgtcttccactgtcagtcctct
gtgatgtcagtctgctttgcccgtttccatcctaatttggtggttggtggcacctattca
ggccagattgtcctctgggacaatcgcagtcatcgaagaacccctgtccagaggaccccc
ttgtcagccgctgcacacacacatcctgtgtactgtgtcaatgttgttgggacccagaat
gctcacaacctgatcactgtctctaccgatggcaaaatgtgttcctggagcctggacatg
ctctcaaccccacaggagagcatggagctggtgtacaacaagtccaagcctgtggctgtt
acaggaatggccttcccgacgggagatgtcaacaacttcgtggtcggcagtgaggaaggt
accgtctacacagcttgtcgtcatggaagcaaagcaggcattggtgaggtctttgaaggt
caccaagggccagtgacaggcattaactgccacatggcagtgggtcccatcgacttttct
catctgtttgtcacatcatcatttgactggactgtcaaactgtggaccacaaagcacaac
aagccgctctactcctttgaagacaatgcagactatgtgtacgatgtcatgtggtccccc
gtgcatcccgcgctctttgcctgcgtggacgggatggggcgcttggacctctggaacctc
aacagtgacaccgaggtgccaacagcaagtgtggctattgagggggcttctgccctaaac
cgggttcgttgggcacaaggtggtaaggaagttgcagtaggtgactcagaaggccgcatc
tggatctacgatgttggagagcttgcggttccccacaatgatgaatggacgcgatttgcc
cggaccctggtggagatccgcgccaatagggctgacagcgaggaggaaggtgcggttgag
ttagctgcctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (13)   
   RefSeq(nuc) (3)   
   GenBank (5)   
   EMBL (5)   
Protein domain (2)   
   Pfam (2)   
All databases (35)   

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