KEGG   Rattus norvegicus (rat): 296099
Entry
296099            CDS       T01003                                 
Symbol
Tp53bp1
Name
(RefSeq) TP53-binding protein 1
  KO
K20915  tumor suppressor p53-binding protein 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    296099 (Tp53bp1)
SSDB
Motif
Pfam: 53-BP1_Tudor BRCT_3 BRCT_2 BRCT Tudor_5 DUF4537 RTT107_BRCT_5 Tudor_2
Other DBs
NCBI-GeneID: 296099
NCBI-ProteinID: NP_001358188
RGD: 1308039
Ensembl: ENSRNOG00000013837
Position
3:complement(128620320..128724716)
AA seq 1932 aa
MPGEQMDPTGSQLDSDFSQQDTPCLIIEDSQPESQALEEDAGSHFSVLSRHLPNLQMHKE
NPVLDIMSNPEQTVAEQGDSNSSFSEHLKEKKASDPVESSHLGTSGPISQVIERLPQPNR
TSSALGVTVEAASLAEEEKEEELEEEKEEVGVNAPDADPRSLAEDSASSQLGFGVLELSQ
SQDVEEHTVPYDVKQEHLQLVTTNSGSTQLSDVDANTDGKAIKCEEQSTDAISIIEPSKD
IPVTVQPSKGSHVVEEQNLPLVRSEDLPSSPQVSVAAVETKEQVPAQELLEGGLQVQVSS
EPEVSSTQEDLFDQSSKTASDGCSTPSREEGGCSPVSTPATTLQLLQLSGQKPLVQESLS
TNSSDLVAPSPDAFRSTPFIVPSSPTEQGQRKDEPMDMSVIPEGGEHFQKLQDDEAVDIE
KPLLPSQPAVSPQASTPVSRSTPVFTPASLPIPSQPEFSHDIFIPSPSLEEPSNDVEKGG
GLHSSSLTVECSKTSESEPKNFTDDLGLSMTGDSCKLMLSTSECSQSSKMESLGSPRTEE
VGENTQVEDTEPSSPVTKSKLPAESESVLVNPTQDDQVEMSQNVDKAKEDEVEDRGDVDV
LAAGCKGREDMVAEDVCIDLTCDSGSQAVPSPATRSEALSSVLDQEEAMEIKEHHPEEEF
SGSEVEEVPETPCGSHREESKEEPMESIPLHLSLTETQSEALCLQKEAPKEECPEAMEVE
TSVISIDSPQKLPVLDQELEHKDPETWEEATSEDSSVVIVDVKEPSPRVDISCEPVEGVG
KCSDSQSLEGAAPEEEPCAENRLNTPEEKRVECDGDSKAETTEKNSVTEDSPQPPLPSVR
DEPVRPDQELQQPQVQEKESPVTLDAKVADDKHLGSEGSCQQLEKAPARASQSFCESSSG
ISNYPESTIATSDVMSESMVEINDPLLGNEKGDSESAPEMDGKLSLKMKLVSPETEASEE
SLQFSLEKPTTAERRNGSTAIAEPVASPQKPMSVFGCIYEAQQEEEAQSGDPPSTPVRTN
LLHFPSAQEEDREEPDATPQLRQSEQPVKLIGPVKDAAASEDSASSVSQQRASQGSLSPQ
EEVMEADLLEGLGANQDRPSKILMERPTQSNIGIQTMDHSLCAPETVSAATQTVKNVCEQ
GTSTVEQNSGKQDATVQTERGSGEKPASAPVDDTESLHSQGEEEFEMPQPPHGHVLHRHT
RTIREVRTLVTRVITDVYYVDGTEVERKVTEETEEPIVECQECETEVSPSQTGGSSGDLG
DISSFSSKASSSHHTSSGTSLSAIHSSGSSGRGAGPLKGKTSGTEPADFALPSSRGGPGK
LSPRKGISQTGAPVCEEDGDAGLGIRQGGKAPVTPRGRGRRGRPPSRTTGTRETVVSGPL
GIEDTSPSMSPDDKSFTRIMPRVPDSTKRMDASSGALRRSDSPEIPFQAATGSSDGLDSS
SSGNSFVGLRVVAKWSSNGYFYSGKITRDVGAGKYKLLFDDGYECDVLGKDILLCDPIPL
DTEVTALSEDEYFSAGVVKGHRKESGELYYSIEKEGQRKWYKRMAVILSLEQGNRLREQY
GLGPYEAVTPLTKAADISLDNLVEGKRKRRSNISSPATPTASSSSSTTPTRKTTESPRAS
MGVPSGKRKLTTSEEERSPAKRGRKSATVKPGTVGAAELVSPCESGDNTGEPSVLEEPRG
PLPLNKTLFLGYAFLLTMATTSDKLASRSKLLDGPTGSSEEEEEFLEIPPFNKQYTECQL
RAGAGYILEDFNEAQCNTAYQCLLIADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQL
QNYRNYLLPAGYSLEEQRILDWQPRENPFQNLKVLLVSDQQQNFLELWSEILMTGGAASV
KQHHSSAHNKDIALGVFDVVVTDPSCPASVLKCAEALQLPVVSQEWVIQCLIVGERIGFQ
QHPKYKHDYVSH
NT seq 5799 nt   +upstreamnt  +downstreamnt
atgccaggggagcagatggaccctactggaagtcaattggattcagatttctctcagcaa
gacactccttgcctgataatagaagattctcagcctgaaagccaggctctggaagaagat
gcaggttctcacttcagcgtgctatctcgacaccttcctaatctgcagatgcacaaagag
aacccggtgttggatattatgtcaaatccggaacaaactgttgcagaacaaggagacagt
aacagctcattcagtgaacatctgaaagaaaagaaagcgtcagaccctgtggagtcttct
catttgggtacgagtggtcccatcagtcaggtcatagaacggttacctcagcccaacagg
acaagcagtgctctgggagtgacagtagaagctgcttctcttgcagaggaggagaaggag
gaagagttggaagaggagaaggaagaggtgggagtgaacgctcctgatgctgacccacgc
tcccttgctgaagattctgcttcatcccagttgggctttggagttctggaattgtcccag
agccaggatgttgaagagcatacagtgccatatgatgtcaaacaagagcatctgcagttg
gtgaccactaactcgggttctacccagctatcggatgtggatgcaaatactgatgggaaa
gcaattaaatgtgaagaacagtccactgacgccatctctataatagaacccagcaaagac
atccctgttacagtgcagcccagcaaaggctcccatgtggtagaagaacaaaatctacca
cttgtaaggtctgaagacctgccttccagtcctcaagtttctgttgctgctgtggaaaca
aaggagcaggtacctgcccaagagctgctggaaggggggctgcaggttcaggtgtcatca
gagcctgaggtttcctcaactcaggaagacttgtttgaccagagcagtaaaacagcttct
gatggttgttctactccttcaagggaggaaggcgggtgctctccggtttccacacctgct
accaccctgcagctcctgcagctctctggtcagaagccccttgttcaggagagtctttcc
acgaattcctcagatcttgttgctccttcccctgatgctttccgatctaccccttttatc
gttcctagcagtcccacagagcaaggacagagaaaagatgagcccatggatatgtcagtg
atacctgaaggaggggagcatttccaaaagcttcaggatgacgaagcagtggacatagag
aaaccccttctcccatctcagcctgctgtatcaccgcaagcgtccacaccagtgtctcgg
agcacgccagttttcactcctgcctcacttcccatcccgtcccagcccgagttctctcat
gacatctttattccatcaccaagtttggaagaaccatcgaatgatgtggagaaaggtgga
ggtttgcatagctcgtctctcactgttgagtgttctaagacgtcagagagtgaaccaaag
aatttcactgatgaccttgggctctccatgacgggggattcgtgcaagctgatgctttct
acaagtgagtgtagtcagtcctcaaagatggagagcttgggttctcccaggactgaggaa
gtcggagagaacacacaggttgaggatactgaaccttcatccccagttactaagtctaaa
cttcctgccgaaagtgaaagtgtcctggtgaatccaacacaggacgaccaggtagaaatg
agtcagaatgtagataaagcaaaggaagatgaagtggaggatagaggtgacgttgacgtt
ttagctgctggctgtaaaggcagagaagacatggttgctgaagatgtttgcatcgacctc
acttgtgattctgggagtcaggcagttccttctccagctacccgctctgaggcactttcc
agtgtcttagatcaggaggaagctatggaaattaaagaacaccatccagaggaagagttt
tcgggatctgaggtagaagaagtccctgagactccctgtggaagtcacagagaggagtcc
aaagaggaaccgatggaaagtattccactgcacctttctctgactgaaactcagtctgag
gcgttgtgtcttcagaaggaagcccctaaagaggaatgcccagaagctatggaagttgaa
accagtgtgattagtattgactccccccagaagttgccagtacttgaccaggaattggag
cataaggatccagaaacttgggaagaagctacttctgaggactccagtgttgttatcgtt
gatgtaaaggagccctctcctagagttgacatttcctgtgaaccggtggagggagtggga
aaatgctcagactcccagtccttggagggtgcggctccagaggaagaaccctgtgctgag
aatagattaaatactccagaggaaaagagagttgagtgtgatggagattcaaaagcagag
accacagagaagaactctgtaacagaagactctccacaacctcctttgccttcagtgaga
gacgaacctgtcagacctgaccaggagttgcagcagccccaggttcaagagaaagagagc
cccgtgactctagatgcaaaggtggctgatgacaagcatctggggtcagagggctcatgc
cagcagcttgagaaggcccctgcccgagcctcccagagtttctgtgaaagttctagtggg
attagcaactatccagaaagcaccatagcaaccagtgatgtcatgtctgaaagcatggtg
gagatcaacgatcctctacttgggaatgaaaaaggggattctgagtctgccccagaaatg
gatggaaaactatctctgaaaatgaaacttgttagtcctgagacagaggccagtgaagaa
tctttacagtttagcctggaaaagcctacaactgctgagagaagaaatggatctactgcc
attgctgagcctgttgccagtccccagaagcccatgtctgtgtttggctgcatctatgaa
gcccagcaagaggaggaggctcagagtggggatcctccttccacacctgtcaggacgaac
ttgctccattttccaagtgctcaagaagaagacagagaagaaccggatgctaccccacag
ctcaggcagagtgaacagcctgtgaagctgattgggcctgtcaaggatgcggctgcttct
gaggactctgcctcttctgtttcccagcagagggcctcacagggatcattgagtcctcaa
gaggaagtgatggaagcagacctgcttgaaggactgggtgctaaccaggacagacctagt
aagatcttgatggaaaggcccacccagagtaacataggaatccagaccatggaccattcc
ctatgtgcaccagagaccgtttcagcagccacccagactgtgaagaatgtatgtgagcag
gggaccagtacagtggagcagaactctgggaaacaagatgccactgtgcagactgagcgg
gggagtggagagaaacctgccagtgctcctgtggatgacacagagtccctccacagccag
ggagaagaagaatttgaaatgcctcagcctccacatggccatgtcttgcatcgtcacacg
agaacgattcgagaagtccgtacacttgtcacccgtgtcatcacagatgtttattatgtg
gatggaacagaagtggaaaggaaagtaacggaggagactgaagaaccaatcgtagaatgt
caggaatgtgaaacagaagtttccccttcacagactggcggttcctctggggacctgggg
gacatcagctccttctcctccaaagcctccagctcacaccacacatccagtggaacaagt
ctctcagccatacacagcagtggcagctcagggcgaggagctgggccactcaaaggaaaa
accagtgggacagaacctgcagattttgccttacccagttcccgaggaggcccaggaaaa
ctgagtcctagaaaagggatcagtcagacaggggcaccagtgtgtgaggaagatggtgat
gcaggccttggcatcagacaaggagggaaggctccagttacacctcgtggtcgtgggcga
aggggccgcccaccttctcggaccactggaaccagagaaacagttgtgtctggtccattg
ggcatagaagacacttcacctagcatgtcacccgatgacaagtccttcacccgcattatg
ccccgtgtgccagactctaccaaacggatggatgccagttctggtgctttgcggcggagt
gattctccagagattccttttcaggctgctactggttcctctgatggcttggattcctca
tcttctggaaacagctttgtggggctccgggttgtagccaagtggtcgtccaatggctac
ttttactctgggaaaatcacacgagatgtcggagctgggaagtataagctgctctttgat
gacgggtatgagtgtgacgtgctgggcaaggacattctcctgtgtgaccccatacccctg
gacactgaagtgaccgccctctcagaagatgagtatttcagtgcaggagtggtgaaagga
cacaggaaggagtctggggagctgtattacagcattgaaaaagaaggccaaaggaagtgg
tataaacggatggcagtcattctgtccttggagcaaggaaacagactgagagaacaatat
gggcttggcccatatgaagctgtcacaccactcacaaaggcagcagatatcagcttagac
aatttggtggaaggaaagaggaaacggcgcagtaacatcagctccccagccacccccact
gcctccagtagcagcagcacaacacccacacgtaaaaccacagagagtccccgtgcttcc
atgggagttccgtcaggcaaaaggaaacttacgacttctgaagaggaacggtcccctgct
aagcgaggccgaaagtctgctactgtgaaacctggaacagtgggggcagcagagcttgtg
agcccctgtgagagtggagacaacacaggtgagccttctgtcctggaagagccaagaggg
cctttgcccctcaacaagaccttgtttctgggctatgcctttctcctcaccatggctaca
actagtgacaagctggccagccgctctaagctgctagatggtcctacaggaagcagcgaa
gaagaggaggaatttttagaaattcctcctttcaacaagcagtatacagaatgccagctt
cgagcaggagctgggtatatcctggaagacttcaatgaagcccagtgtaacacagcctac
cagtgtctcctaattgcggaccagcactgtcgaacccggaagtacttcctgtgccttgcc
agtggcattccttgtgtgtctcatgtctgggtccatgacagctgccatgccaaccagctt
caaaactaccgtaattatctgctgcctgctgggtatagccttgaggagcaacgaattctg
gactggcaaccccgtgaaaaccctttccagaatctgaaggtcctcttggtgtcagatcaa
cagcagaacttcctggagctctggtctgagatccttatgactggaggggcagcctctgtg
aagcagcatcattcaagtgcccataacaaagacattgctttaggggtatttgatgtggtg
gtgacagacccctcatgcccagcctcggtgctcaagtgtgctgaagccttgcagctgcct
gtggtatcacaagaatgggtgatccagtgcctcattgttggggagagaattggattccag
cagcatccaaaatacaaacatgattatgtttctcactaa

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   RefSeq(pep) (9)   
DNA sequence (12)   
   RefSeq(nuc) (10)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (38)   

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