KEGG   Rattus norvegicus (rat): 296102
Entry
296102            CDS       T01003                                 
Symbol
Ell3
Name
(RefSeq) RNA polymerase II elongation factor ELL3
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    296102 (Ell3)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rno01009]
    296102 (Ell3)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    296102 (Ell3)
Protein phosphatases and associated proteins [BR:rno01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     296102 (Ell3)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     296102 (Ell3)
    Little elongation complex (LEC)
     296102 (Ell3)
SSDB
Motif
Pfam: Occludin_ELL ELL UPF0223 BicD
Other DBs
NCBI-GeneID: 296102
NCBI-ProteinID: NP_001011957
RGD: 1309917
Ensembl: ENSRNOG00000022868
UniProt: Q5XFX8
Position
3:complement(128866755..128870896)
AA seq 387 aa
MEGTQEALSGKMRLLFTPAARTSLLMLRLNEAALRALQECQQQQVRPVIAFQGQRGYLRL
PGPGWSCLFSFIVSQCGQEGGGLDLVYQRLGRSGPNCLHCLGSLRERLTIWAAMDTIPAP
LLAQEHLTEGTRESESWQDSEDEPEGHPQMALQEVSDPLASNHEQSLPGSSSEPMAQWEV
RNHTYLSNREPDQPLPSSASQKRLDKKRSAPITTEEPEEKRPRALPLASSPLQGLSNQDS
PEEQDWGQDADGDSRLEQSLSVQSASESPSPEEVPDYLLQYSTIHSAEQQQAYEQDFETD
YAEYRILHARVGAASQRFTELGAEIKRLQRGTPEHKVLEDKIVQEYKKFRKRYPSYSEEK
RRCEYLHEKLSHIKGLILEFEEKNRGS
NT seq 1164 nt   +upstreamnt  +downstreamnt
atggaggggacccaggaagctctgagtgggaaaatgcggctcctcttcacccctgctgct
cgaaccagcctcctgatgctaagactcaacgaggcggcgctgcgggcactacaagagtgt
cagcagcaacaggtacggccagtgatcgctttccaaggccaacgagggtatctaaggctc
ccaggtcctggatggtcctgcctcttctccttcatagtatcccagtgtggccaagagggt
ggtggcttggaccttgtgtaccaacgcttaggcagatctgggcctaactgtctccactgc
ctgggctcactgagagagcgacttactatttgggcagccatggatacgatcccagctcca
ctgttagctcaggaacacctgactgaaggtaccagagagtctgagagctggcaggacagc
gaagatgaacctgaaggccatccccagatggcactacaagaggtgtctgacccactggca
agcaaccatgaacagtcactcccaggatcctccagtgagcccatggcacagtgggaagtg
agaaaccacacttacctttcaaacagagagcctgatcagccactgccttcctctgctagc
cagaaacgcctggacaagaaacgttcagcacctataaccactgaagaaccagaggaaaaa
aggcccagagctctgcctctagcctcaagtccactacaaggactatcaaatcaggactca
ccagaggaacaagactgggggcaagatgcagatggagattccaggctggagcagagtctc
tcagttcaatcagcttctgaatccccaagccctgaggaggtaccagattatctcctgcaa
tacagcaccatccacagtgcagagcagcagcaggcctacgagcaggactttgagaccgac
tatgctgaataccgcattctgcacgcccgtgtcggggctgcaagccagaggttcacagag
ctgggggcagagatcaagagacttcagcgaggaactccagagcacaaggtgctagaagac
aagatagtccaggagtataaaaagttcagaaagcggtatcccagttacagcgaggagaag
cggcgctgtgagtacctgcatgagaaactgtcccacattaaaggtctcatcctggaattt
gaggaaaagaacaggggcagctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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