KEGG   Rattus norvegicus (rat): 29616
Entry
29616             CDS       T01003                                 
Symbol
Ptprm
Name
(RefSeq) receptor-type tyrosine-protein phosphatase mu precursor
  KO
K05693  receptor-type tyrosine-protein phosphatase mu [EC:3.1.3.48]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04514  Cell adhesion molecules
rno04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    29616 (Ptprm)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    29616 (Ptprm)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rno01009]
    29616 (Ptprm)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.48  protein-tyrosine-phosphatase
     29616 (Ptprm)
Protein phosphatases and associated proteins [BR:rno01009]
 Protein tyrosine phosphatases (PTPs)
  Class I PTPs (Classical)
   Receptor PTPs
    29616 (Ptprm)
SSDB
Motif
Pfam: Y_phosphatase MAM fn3 ig DSPc TM_ErbB1 I-set PTPlike_phytase Pur_ac_phosph_N Y_phosphatase3 Ig_3 PTP_tm ECSCR Ig_2 EphA2_TM DctM Nitrate_red_gam
Other DBs
NCBI-GeneID: 29616
NCBI-ProteinID: NP_001162103
RGD: 620776
Ensembl: ENSRNOG00000011700
UniProt: F1LPJ1
Position
9:complement(114086380..114791000)
AA seq 1486 aa
MRTLGTCLVTLAGLLLTAAGETFSGGCLFEEPYSTCGYSQADDDDFNWEQVNTLTKPTSD
PWMPSGSFMLVNTSGKPEGQRAHLLLPQLKENDTHCIDFHYFVSSKSNAAPGLLNVYVKV
NNGPLGNPIWNISGDPTRTWHRAELAVSTFWPNFYQVIFEVVTSGHQGYLAIDEVKVLGH
PCTRTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRR
FIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQLASVGATYLWI
QLNANSINGDGPIVAREVEYCTASGSWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPGE
GGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVRYC
YQVGGQEQVREEVSWDMDNSHPQHTITNLSPYTNVSVKLILMNPEGRKESQELTVQTDED
LPGAVPTESIQGSAFEEKIFLQWREPTQTYGVITLYEITYKAVSSFDPEIDLSNQSGRVS
KLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPATNQFTTKISAPSMPAYEFETPLNQT
DNTVTVLLKPAQSRGAPVSVYQIVVEEERPRRTKKTTEILKCYPVPIHFQNASILNSQYY
FAAEFPADSLQAAQPFTIGDNKTYNGYWNTPLLPHKSYRIYYQAASRANGETKIDCVRVA
TKAAIIVTQLTTPYIRIAPAAGDGQLTGAVTPKPVPEPEKGTDHTVKIAGVIAGILLFVI
IFLGVVLVMKKRKLAKKRKETMSSTRQEMTVMVNSMDKSYAEQGTNCDEAFSFMDTHNLN
GRSVSSPSSFTMKTNTLSTSVPNSYYPDPFVPTAILDETHTMASDTSSLAQPHTYKKREA
ADVPYQTGQLHPAIRVADLLQHITQMKCAEGYGFKEEYESFFEGQSAPWDSAKKDENRMK
NRYGNIIAYDHSRVRLQMLEGDNSSDYINGNYIDGYHRPNHYIATQGPMQETVYDFWRMV
WYENTASIIMVTNLVEVGRVKCCKYWPDDTEIYKDIKVTLIDTELLAEYVIRTFAVEKRG
IHEIREIRQFHFTGWPDHGVPYHATGLLGFVRQVKSKSPPNAGPLVVHCSAGAGRTGCFI
VIDIMLDMAEREGVVDIYNCVRELRSRRVNMVQTEEQYVFIHDAILEACLCGDTSIPASQ
VRSLYYDMNKLDPQTNSSQIKEEFRTLNMVTPTLRVEDCSIALLPRNHEKNRCMDILPPD
RCLPFLITIDGESSNYINAALMDSYKQPSAFIVTQHPLPNTVKDFWRLVLDYHCTSVVML
NDVDPTQLCPQYWPENGVHRHGPIQVEFVSADLEEDIISRIFRIYNASRPQDGHRMVQQF
QFLGWPMYRDTPVSKRSFLKLIRQVDKWQEEYNGGEGRTVVHCLNGGGRSGTFCAISIVC
EMLRHQRTVDVFHAVKTLRNNKPNMVDLLDQYKFCYEVALEYLNAG
NT seq 4461 nt   +upstreamnt  +downstreamnt
atgaggacacttgggacttgcctggtgactttagctggacttttgctaactgcggccggg
gagacattttcaggtggctgcctctttgaggagccatacagcacatgtggatatagtcaa
gctgacgacgatgacttcaattgggagcaggtgaacaccttgaccaaaccgacctctgac
ccatggatgccatcaggctccttcatgctggtgaacacttctgggaaaccggaaggccag
agagctcacctgctcctgcctcagcttaaggaaaacgacacccactgcattgactttcac
tactttgtatccagcaagagtaacgcggccccggggttgctcaatgtctacgtgaaggtg
aacaatgggccgctggggaatcccatttggaacatatctggagacccaacccgcacgtgg
cacagggcagagctggccgtcagcaccttctggcccaacttttaccaggtgattttcgaa
gtggtgacctctggacatcaaggctaccttgctattgatgaggttaaggtgttgggacat
ccgtgtacgagaactccccacttcctgcggattcagaatgtggaggtgaacgctggccag
tttgctaccttccagtgcagcgccataggcaggacagtggctggggaccggctctggcta
caggggattgacgtccgtgatgctcctctgaaggagataaaggtgacaagttccaggaga
ttcatagcctcatttaacgtcgtaaacacgaccaagagagatgctgggaagtatcgttgc
atgattcgtacggaaggaggtgtcgggatatcaaactacgcagaactggtagttaaagag
ccgcctgttcccatcgccccacctcagctcgcctctgtgggagcaacctatctgtggata
cagctcaacgccaactccatcaatggggatgggccaattgtggcccgcgaggttgagtac
tgcacagccagtgggagctggaacgatcggcagccagtggattccacgagttacaagatt
gggcaccttgacccagacaccgagtatgagatcagtgtacttctcaccagaccaggggaa
ggtggcactggatctcccgggccagcgctgagaacaagaacgaagtgtgctgatcccatg
cgtggcccgagaaaactagaagttgtagaggtcaaatctcgacaaatcaccatccgctgg
gagccatttggatacaatgtaactcgttgccatagttataatctcacagtgcgctactgt
taccaggttggagggcaggagcaagtgcgagaagaagtaagctgggacatggataattcc
caccctcagcacacaatcaccaacctgtccccctacaccaacgtcagtgtgaagctcatc
ctcatgaaccccgaggggcgcaaggaaagtcaagaactcactgtgcagacagatgaagat
ctcccaggagccgtccccactgagtccatccaaggcagtgcctttgaagagaagatattt
ctccagtggagagagccgacacaaacatatggggtcatcactttatacgagatcacctac
aaagcagtcagctcctttgacccggagatagatttgtccaaccaaagcggaagggtttca
aaactgggaaatgaaactcactttctgttctttggcctgtatcccggaaccacatactcc
ttcaccatcagagccagcacagccaaggggttcggacctccagccacaaaccagttcacc
accaaaatatcagcaccctccatgccagcctatgaatttgagacacctttgaatcagact
gacaatacggtgacagtgctattgaaaccagctcaaagcagaggggctccagtcagtgtc
taccagatcgttgttgaggaagaacgtcctcggagaactaagaagacaacagagatcttg
aagtgttacccagtgccgattcacttccagaatgcttccatcctgaactcacaatactac
tttgctgcagagtttcccgcagacagtctccaagccgcgcagccctttaccattggtgac
aataagacatacaatggctactggaacacccccctcctcccccataaaagctacagaatt
tattaccaggctgctagtagagccaatggggaaaccaaaattgactgtgttcgagtagcc
acaaaagctgcgataatcgtgactcagcttacaacaccttacattcgcatcgcccctgct
gcaggcgacggccaactaacaggggcagttactccaaagccagtccctgaacctgagaaa
ggaacagaccacacggtgaaaatcgccggagtgattgcaggcatccttctgtttgtcatc
atattccttggcgtcgtgctggtcatgaagaagaggaaactggccaagaagaggaaggag
acgatgagcagcacccggcaggagatgacagtgatggtgaactcgatggacaagagctac
gctgagcaaggcaccaactgtgatgaagccttctccttcatggacacgcacaaccttaac
gggagatccgtgtcttcaccgtcatcctttacaatgaaaacaaacacgctgagcacctca
gtgccgaattcctattacccagacccatttgtgccaactgcaatcttagatgagacccac
accatggccagcgacaccagcagcctagcacagccccatacttacaagaagcgggaagcc
gcggacgtgccttatcagacgggacagcttcacccagctatccgtgtggcagatctcctc
caacacatcactcagatgaagtgtgctgagggctatggcttcaaggaggagtatgagagc
ttctttgaaggacagtctgcaccgtgggactcggctaagaaagacgagaacagaatgaag
aatagatacggaaacatcatagcatatgatcactctcgggtaaggctgcagatgctggaa
ggagacaacagttcagactatatcaatggcaattacatcgatggctatcatcgacccaac
cattatatcgcaacccaaggacccatgcaggagaccgtctacgacttctggaggatggtg
tggtatgagaacacggcaagcatcatcatggtgaccaaccttgtggaagtgggaagggtg
aaatgctgcaaatactggccggacgacacggagatctataaagacataaaagtcacgcta
atagacacagagctgctggcagaatatgtgataagaacctttgccgtggagaagagaggt
attcatgaaatacgagagatcagacagttccacttcactggctggccggatcacggcgtc
ccctaccacgccaccggcctgctgggtttcgtccggcaggtcaaatccaagagcccaccc
aacgcaggcccactggtggtacactgcagtgccggcgccgggaggacaggctgcttcatc
gtcatcgatatcatgttggacatggcagaaagggaaggcgtggtagacatctacaactgt
gtcagagagcttcggtccaggagagtcaacatggtgcagacagaggagcagtacgtcttc
atccacgatgccatcctggaagcctgcctttgtggagacacctccatccctgcttcccaa
gtcaggtctctgtattacgacatgaacaaactggacccacagacaaactcaagccaaatt
aaagaggaattccggactctcaacatggtgacccccacgctgcgtgtagaggactgcagc
atcgcgctcctaccccggaaccacgagaaaaaccgctgcatggacatcctgcccccggat
cgctgcctgcccttcctcatcaccattgacggagagagcagcaactacatcaacgcagcc
ctgatggacagctacaaacagccctcagcgtttatagtcacccaacatcctttgccaaac
accgtcaaagacttctggcgactggtgttggattaccactgcacgtccgtagtcatgctc
aacgatgtggatcctacccagttatgtccacagtactggccagaaaatggagtgcacagg
cacggccccatccaggtggaatttgtgtctgcagacttagaagaagacatcatcagcagg
attttcaggatttacaatgcctccaggccccaggatggacatcggatggttcagcagttc
cagttcttgggctggccgatgtatagggacacacctgtgtccaagcgctccttcttgaag
ctcatccgacaggtagacaagtggcaggaggaatacaatggcggcgaagggcgtacagtc
gtgcactgcttgaacggaggaggccgcagcggtacattctgtgccatcagcattgtctgt
gagatgctgcgacaccagagaactgtggatgtcttccacgccgtcaagacattgaggaac
aacaagccaaacatggtggacctcctggatcagtacaagttctgctatgaggtggccctg
gagtacctgaatgctggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (1)   
   RefSeq(pep) (9)   
DNA sequence (13)   
   RefSeq(nuc) (9)   
   GenBank (2)   
   EMBL (2)   
Protein domain (17)   
   Pfam (17)   
All databases (53)   

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