KEGG   Rattus norvegicus (rat): 296315
Entry
296315            CDS       T01003                                 
Symbol
Rab5if
Name
(RefSeq) GEL complex subunit OPTI
  KO
K26496  GEL complex subunit OPTI
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    296315 (Rab5if)
Membrane trafficking [BR:rno04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    296315 (Rab5if)
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Multi-pass translocon (MPT) complex
    296315 (Rab5if)
SSDB
Motif
Pfam: EMC6 DUF2244
Other DBs
NCBI-GeneID: 296315
NCBI-ProteinID: NP_001013944
RGD: 1307752
Ensembl: ENSRNOG00000020317
UniProt: F7F1P2 Q5FVK9
Position
3:165818060..165828071
AA seq 129 aa
MSGGRRKEEPPQPQLANGALKVSVWSKVLRSDAAWDDKDEFLDVIYWFRQIIAVVLGVIW
GILPLRGFLGIAGFCLINAGVLYLYFSNYLQIDEEEYGGTWELTKEGFMTSFALFMVIWI
IFYTAIHYD
NT seq 390 nt   +upstreamnt  +downstreamnt
atgagcggcgggcggcggaaagaggagccgcctcagccgcagctagccaacggggccctc
aaggtgtccgtgtggagcaaggtgctgcggagcgacgcggcctgggacgacaaggatgaa
tttttagatgtgatctactggttccgacagatcatcgctgtggttttgggtgtcatttgg
ggcattttgcccttgcgaggcttcttgggaatagcaggattctgcctgatcaatgcagga
gtcctgtatctctacttcagcaactacctacagatcgacgaggaagagtatggtggtaca
tgggagctcaccaaagaagggtttatgacgtcatttgccttgttcatggtcatttggatc
atcttttacactgccatccactatgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system