KEGG   Rattus norvegicus (rat): 29643
Entry
29643             CDS       T01003                                 
Symbol
Sv2c
Name
(RefSeq) synaptic vesicle glycoprotein 2C
  KO
K06258  MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    29643 (Sv2c)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rno02000]
    29643 (Sv2c)
Transporters [BR:rno02000]
 Major facilitator superfamily (MFS)
  Protein transporters
   Vesicular neurotransmitter transporter (VNT) [TC:2.A.1.22]
    29643 (Sv2c)
SSDB
Motif
Pfam: MFS_1 Sugar_tr Pentapeptide_4 Pentapeptide_3 MFS_2
Other DBs
NCBI-GeneID: 29643
NCBI-ProteinID: NP_113781
RGD: 619718
Ensembl: ENSRNOG00000018094
UniProt: Q9Z2I6 A6I4Z9
Structure
Position
2:complement(28967631..29163168)
AA seq 727 aa
MEDSYKDRTSLMKGAKDIAKEVKKQTVKKVNQAVDRAQDEYTQRSYSRFQDEDDDDDYYP
PGETYSGEANDDEGSSEATEGHDEEDEIYEGEYQGIPSTNQGKDSIVSVGQPKGDEYKDR
RELESERRADEEELAQQYELIIQECGHGRFQWALFFVLGMALMADGVEVFVVGFVLPSAE
TDLCIPNSGSGWLGSIVYLGMMVGAFFWGGLADKVGRKQSLLICMSVNGFFAFLSSFVQG
YGFFLLCRLLSGFGIGGAIPTVFSYFAEVLAREKRGEHLSWLCMFWMIGGIYASAMAWAI
IPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVALTFMPESPRFLLEVGKHDEAWMIL
KLIHDTNMRARGQPEKVFTVNKIKTPKQIDELIEIESDTGTWYRRCFVRIRTELYGIWLT
FMRCFNYPVRENTIKLTIVWFTLSFGYYGLSVWFPDVIKHLQSDEYALLTRNVQKDKYAN
FSINFTMENQVHTGMEYDNGRFLGVKFKSVTFKDSVFKSCTFDDVTSVNTYFKNCTFIDT
LFENTDFEPYKFIDSEFQNCSFLHNKTGCQITFDDDYSAYWIYFVNFLGTLAVLPGNIVS
ALLMDRIGRLTMLGGSMVLSGISCFFLWFGTSESMMIGMLCLYNGLTISAWNSLDVVTVE
LYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVSITKAIPILLASTVLVCGGLVGLRLPD
TRTQVLM
NT seq 2184 nt   +upstreamnt  +downstreamnt
atggaagactcctacaaggataggacttcactgatgaagggcgccaaggacattgccaaa
gaggtgaagaagcaaacagtgaagaaggtgaaccaggcagtggaccgggcccaggatgaa
tacacccagcggtcctacagccgattccaggatgaagatgatgatgatgactactaccca
cctggagaaacctacagtggggaggccaatgatgatgaaggctcaagtgaagccactgag
ggtcacgatgaagaagacgagatctatgaaggggaataccagggcatccccagcacgaac
caagggaaggacagcatagtgtctgtaggacaacccaaaggagatgagtacaaggaccgc
agagagctggagtcagagaggagggctgatgaggaggagctcgcccagcagtatgagctg
ataatccaagagtgtggccatggccgtttccagtgggcccttttcttcgtcctgggcatg
gctctcatggcagacggcgtggaggtgtttgtggtgggctttgtgttacccagtgcagag
acagacctatgcataccgaattcaggatctggatggctaggcagcatagtgtacctcggg
atgatggtgggggcgttcttctggggaggactggcagacaaagtgggaaggaagcagtct
cttctgatttgcatgtccgtcaacggattctttgccttcctttcttcatttgtccaaggt
tacggcttctttctcctctgtcgtttgctttcaggattcgggattggaggcgccattccc
actgtgttctcctactttgctgaagtcctggcccgggagaagcgcggtgagcacctcagt
tggctctgcatgttctggatgattggcggtatctatgcttcagccatggcctgggccatc
atcccccactatgggtggagcttcagcatgggctcagcctaccagttccacagctggcgc
gtcttcgtcatcgtctgtgccctcccgtgcgtctcctcggtggtggccctcaccttcatg
cccgaaagccctcggttcttgctggaggtaggaaaacatgatgaagcctggatgattctg
aagctaattcatgataccaacatgagagcccggggccagccagagaaggtcttcacggta
aataaaatcaagactcccaagcaaatagatgagctgattgagattgagagtgacacagga
acctggtaccggaggtgttttgttcggatccgcacagaactgtacggaatttggttgact
tttatgagatgcttcaactacccggtcagggaaaacaccataaagcttacgattgtttgg
ttcaccctgtcctttgggtactatggactgtccgtttggttcccagatgtcattaaacac
ctccagtctgacgagtacgccctgctgactcggaatgtgcagaaggataaatatgcaaac
tttagcattaacttcaccatggaaaaccaggtccacaccggaatggaatatgacaatggc
aggttcctcggagtcaaattcaaatcggtaaccttcaaggattcagtgtttaagtcctgc
acctttgacgatgtgacctcagtcaacacctacttcaagaactgcacgtttattgatacc
ctttttgagaacacagattttgagccctataaattcatagacagcgagtttcaaaactgc
tcgtttcttcacaataagacgggatgtcagattacttttgacgacgactacagtgcctac
tggatttactttgtcaactttctcgggacattggcagtgttaccaggaaatatcgtgtct
gctctcctgatggacaggatcgggcgcttaacgatgctaggtggctccatggtgctctcg
gggatcagctgcttcttcctgtggtttggcaccagcgaatccatgatgataggcatgctg
tgcttgtacaacggactgaccatctcagcgtggaactctcttgatgtagtcacggtggaa
ctataccccacagaccggagagcaacgggctttggcttcttgaacgcactctgtaaagca
gcggccgtcctgggaaacttaatattcggctccttggtcagcatcaccaaagcaatccct
atcctgctggcttccaccgtgctcgtgtgtggaggactcgtggggctgcgcctgcccgac
acaagaacccaggttctgatgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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