KEGG   Rattus norvegicus (rat): 296467
Entry
296467            CDS       T01003                                 
Symbol
Ythdf1
Name
(RefSeq) YTH domain-containing family protein 1
  KO
K20102  YTH domain-containing family protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    296467 (Ythdf1)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     296467 (Ythdf1)
SSDB
Motif
Pfam: YTH
Other DBs
NCBI-GeneID: 296467
NCBI-ProteinID: NP_001019927
RGD: 1308932
Ensembl: ENSRNOG00000027015
UniProt: Q4V8J6
Position
3:complement(188402228..188417740)
AA seq 559 aa
MSATSVDPQRTKGQENKVQNGSLHQKDAVHDNDFEPYLSGQSNPSNSYPSMSDPYLSSYY
PPSIGFPYSLSEAPWSTAGDPPIPYLTTYGQLSNGDHHFMHDAVFGQPGGLGNNIYQHRF
NFFPENPAFSAWGTSGSQGQQTQSSAYGSSYTYPPSSLGGTVVDGQTGFHSDTLNKAPGM
NSLEQGMVGLKIGDVTTSAVKTVGSVVNSVALTGVLSGNGGTNVNMPVSKPTSWAAIASK
PAKPQPKMKTKSGPIVGGTLPPPPIKHNMDIGTWDNKGPAPKASAPQQTPSPQAAPQPQQ
VAQPLPVQPPPLVQPQYQSPQQPLQPRWVAPRNRNAAFGQSGGANSDSNSVGSAQPTSAP
SVESHPVLEKLKAAHSYNPKEFDWNLKSGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKR
LDGAFRSMSSKGPVYLLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVKWIF
VKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYE
KRQEEEEVVRKERQNRNKQ
NT seq 1680 nt   +upstreamnt  +downstreamnt
atgtcggccaccagcgtggacccccagagaacaaaaggacaagagaataaagtacaaaat
ggttctttgcatcagaaggatgcagttcatgacaatgactttgagccctacctttctgga
cagtccaatccgagtaacagttacccctcgatgagtgatccttacctgtccagctactac
ccaccatccattggatttccttactccctcagcgaggcaccatggtccactgcaggggac
cctcccatcccgtatctcactacctatggacaacttagtaatggagaccatcacttcatg
cacgatgctgtttttgggcaacctgggggtctggggaacaacatttaccagcacaggttt
aattttttccctgaaaaccctgcattctcagcatgggggacaagtggttctcaggggcag
cagactcagagctcagcctatgggagcagttacacttacccaccaagctcccttggtggc
acagttgttgatgggcagacaggttttcacagtgacaccctcaacaaggcccctgggatg
aacagtctggagcagggcatggttggcctgaagattggagatgttaccacctctgcagtt
aaaacagtgggttcagttgtcaacagtgtggcactgactggtgtcctttctggcaatggt
gggacaaatgtaaacatgccagtttcaaaaccaacttcatgggcagccattgccagcaag
cctgcaaaaccacagcctaagatgaaaacgaagagtgggccgatagtagggggtacgctg
cctcctccacctataaagcataacatggacattggtacttgggataacaagggccctgct
ccgaaggcctcagccccccagcagacaccatccccccaggctgctccacagccacagcag
gtagctcagcctctccctgttcagcccccacctttggtccagccacagtatcagagccct
cagcagccacttcaaccccgctgggtggctcctcgaaacagaaatgcagcatttgggcag
agtggaggggccaacagtgacagtaactctgttggaagtgctcagcctacttctgcccca
agtgtagaatcccaccctgtcctggagaaactgaaagctgcccacagctataaccctaaa
gagttcgactggaatcttaagagtgggcgggtgttcatcatcaagagctattctgaggac
gacatccaccgctccatcaagtactccatctggtgtagtactgaacatggcaacaagcgc
ctggatggcgccttccgctccatgagcagcaaggggcctgtttatctgctcttcagtgtc
aatgggagtggacatttctgtggggtggcagaaatgaagtcccctgtggactacggcacc
agtgctggggtctggtctcaggacaagtggaaggggaagtttgatgtgaagtggattttt
gtcaaggatgtgcccaataatcaactgcggcacatcagactggagaataacgacaacaag
cctgtcacaaactcccgtgacacgcaggaggtgcccttagaaaaagcaaaacaagtgctg
aagattattgcctcctataagcacacaacctccatctttgacgacttttctcattatgag
aagcgccaggaggaagaggaggtagtgcgcaaggaaaggcagaatcgaaacaaacaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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