KEGG   Rattus norvegicus (rat): 29657
Entry
29657             CDS       T01003                                 
Symbol
Bmal1
Name
(RefSeq) basic helix-loop-helix ARNT-like protein 1
  KO
K02296  aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04710  Circadian rhythm
rno04728  Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09156 Nervous system
   04728 Dopaminergic synapse
    29657 (Bmal1)
  09159 Environmental adaptation
   04710 Circadian rhythm
    29657 (Bmal1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    29657 (Bmal1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    29657 (Bmal1)
SSDB
Motif
Pfam: PAS_11 PAS PAS_3 HLH PAS_9 Per3-like_PAS-A PAS_4 PAS_2
Other DBs
NCBI-GeneID: 29657
NCBI-ProteinID: NP_077338
RGD: 62003
Ensembl: ENSRNOG00000014448
UniProt: Q9EPW1 A6I877 D3ZT62
Position
1:176766222..176864741
AA seq 626 aa
MADQRMDISSTISDFMSPGPTDLLSGSLSTSGVDCNRKRKGSATDYQESMDTDKDDPHGR
LEYAEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ
HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL
NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC
SGARRSFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE
DSEPDNEGCNLSCLVAIGRLHSHMVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI
LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW
FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT
VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI
LNGGTPDIPSAGLLPGQAQETPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM
AVIMSLLEADAGLGGPVDFSDLPWPL
NT seq 1881 nt   +upstreamnt  +downstreamnt
atggcggaccagagaatggacatttcctccacaatcagtgacttcatgtctccgggcccc
accgacctgctctccggttccctgagcaccagtggtgtggactgcaaccgcaagaggaaa
ggcagtgccactgactaccaagaaagtatggacacagacaaagatgaccctcatggaagg
ttagaatatgcagaacaccaaggaaggatcaaaaatgcaagggaggcccacagtcagatt
gaaaagaggcgtcgggacaaaatgaacagttttattgacgaattggcttctttggtacca
acatgcaatgcgatgtcccggaagttagataaactcaccgtgctcaggatggctgttcag
cacatgaaaacattgagaggtgccaccaacccatacacagaagcaaactacaagccaaca
tttctatccgatgacgaactgaaacacctaattctcagggcagcagatggatttttgttt
gtcgtaggatgtgaccgagggaagatcctctttgtctccgaatctgtcttcaagatcctc
aattatagccagaatgaccttattggccagagtttgttcgactacctgcatccaaaagat
attgccaaagttaaggaacagctatcttcctcggacactgcacctcgggagcgactcatc
gatgcgaagactggacttccggttaaaacggatataacccctgggccctcccgattgtgc
tctggagctcggcgctctttcttctgtaggatgaagtgcaacaggccttcagtaaaggtg
gaagataaggacttcgcctccacctgttcaaagaaaaaagcagatcgaaagagcttctgc
acaatccacagcacaggctacttgaaaagctggccacccacaaagatggggctggacgaa
gacagtgaaccagacaatgagggctgcaatctgagctgcctcgttgcaatcgggcgactg
cactcacacatggttccacagccagtgaacggggaaatacgggtgaagtctatggagtat
gtgtctcgacatgcaatagatgggaaatttgtttttgtagatcagagggcgacggctatt
ttggcatatctaccacaggaacttctaggtacatcgtgttatgagtattttcatcaagat
gatataggacaccttgcggaatgtcacaggcaagttttacagacaagagaaaagatcacg
actaattgctataagtttaagatcaaagatggttcctttatcacactacgaagtcgatgg
ttcagtttcatgaacccgtggaccaaggaagtagaatacattgtctcaaccaacactgtt
gttttagccaatgtcctggaaggcggggacccaaccttcccacagctcacagcatccccc
cacagcatggacagcatgctgccctctggagaaggtggcccaaagaggactcatcccact
gttccaggcattccagggggaaccagagctggagcaggaaaaataggtcgaatgattgcc
gaggaaatcatggaaatccacaggataagagggtcatcaccttccagctgtggctccagc
ccactgaacatcacaagtacgcctccccctgatgcttcctctccaggaggcaagaagatt
ctaaatggagggactccagacattccttccgctggcctactaccagggcaggctcaggag
accccaggctatccctactctgatagttcgtctattcttggtgagaacccccacataggc
atcgacatgatagacaacgaccaaggatcaagcagccccagtaacgacgaggcagcaatg
gctgtcatcatgagcctcttggaagcagatgcggggctgggtggtcccgttgactttagt
gacttgccatggccactgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (18)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (14)   
DNA sequence (22)   
   RefSeq(nuc) (14)   
   GenBank (4)   
   EMBL (4)   
Protein domain (8)   
   Pfam (8)   
All databases (59)   

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