KEGG   Rattus norvegicus (rat): 29663
Entry
29663             CDS       T01003                                 
Symbol
Ap1b1
Name
(RefSeq) AP-1 complex subunit beta-1
  KO
K12392  AP-1 complex subunit beta-1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04142  Lysosome
rno05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    29663 (Ap1b1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    29663 (Ap1b1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    29663 (Ap1b1)
Membrane trafficking [BR:rno04131]
 Endosome - Golgi transport
  Others
   AP-1 complex
    29663 (Ap1b1)
SSDB
Motif
Pfam: Adaptin_N Cnd1 B2-adapt-app_C HEAT_2 HEAT Alpha_adaptinC2 Cnd3 PDS5 Arm RTP1_C1 HEAT_EZ Maestro_HEAT XMAP215_CLASP_TOG Arm_2 FANCI_S3 API5 Transposase_22
Other DBs
NCBI-GeneID: 29663
NCBI-ProteinID: NP_001295227
RGD: 2064
Ensembl: ENSRNOG00000008786
UniProt: A0A0G2K2V2 A6IKJ5
Position
14:84093529..84144835
AA seq 949 aa
MTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITE
YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANA
VAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQIFILDCLANYMPKDDREAQSI
CERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYATLLKKLAPPLVTLLSAEPELQY
VALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKE
YATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIKDIFRK
YPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADELLESFLDGFHDESTQV
QLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVAAKEV
VLAEKPLISEETDLIEPTLLDELICYIGTLASVYHKPPNAFVEGGRGVVHKSLPPRTASS
ESTESPEAAPAGAPASDQPDVIPAQGDLLGDLLNLDLGPPVSGPPLAASSVQMGAVDLLG
GGLDSLMGDEPEGIGDSNFGAPPASVAAAAPARLGAPVSSGLSDLFDLTSGVGTLSGSYV
APKAVWLPAMKAKGLEISGTFTRQVGSISMDLQLTNKALQVMTDFAIQFNRNSFGLAPAA
PLQVHAPLSPNQTVEISLPLNTVGSVMKMEPLNNLQVAVKNNIDVFYFSTLYPLHVLFVE
DGKMDRQMFLATWKDIPNENEAQFQIRDCPLNTEAASSKLQSSNIFTVAKRTVEGQDMLY
QSLKLTNGIWVLAELRIQPGNPSFTLSLKCRAPEVSQHVYQAYETILKN
NT seq 2850 nt   +upstreamnt  +downstreamnt
atgactgactcaaaatacttcacaacaaccaagaaaggggagatcttcgagttgaaggca
gagcttaacagtgacaagaaggagaagaagaaggaggcagtaaagaaagtgattgcatca
atgaccgtgggcaaagatgtcagtgctctcttccctgatgtggtgaactgcatgcagaca
gacaacctggagctaaagaagctggtgtacctgtacttgatgaactatgccaagagtcag
cctgacatggccattatggctgtcaacaccttcgtgaaggactgtgaggaccccaacccc
cttatccgggccctggctgtgaggactatgggctgcatccgagttgacaagatcacagag
tacttgtgtgaaccactccggaaatgcctgaaggatgaagacccatatgtgcgcaagaca
gcagctgtgtgtgtagccaagctccacgacatcaacgcccagctggtagaggaccagggt
ttcctggacacactcaaagacctcatctctgactctaaccccatggtggtagcaaatgca
gtggctgccctgtcagagatcgctgagtctcaccccagtagcaacctgcttgacttgaac
ccacagtctatcaacaagctgctgacagcccttaatgagtgcaccgagtggggccagatc
ttcattctggactgtctggcgaactacatgcccaaggatgaccgtgaggcccagagcatc
tgcgagcgggtcactcctaggctttcccatgccaactctgctgtggtgctgtccgcagtg
aaggtcctgatgaagttcatggagatgctgtctaaggacctggactactatgccacacta
ctcaagaagctggcccctcccctggtcacactgctgtcagcagagccagagttgcagtat
gtggctctgcgcaatattaacctcattgtacagaaaaggccagagattttgaagcatgaa
atgaaggttttctttgtgaagtacaatgaccccatctatgtgaagctggagaaactggac
attatgatccgcctggcctcccaggccaacattgcccaggttttggcagaactcaaagag
tacgcgacagaagtagatgtggattttgtacggaaggcagtgcgtgccattggccgctgt
gccatcaaggtggagcaatctgcagagcgctgtgtgagcacattgcttgatctcatccag
accaaggtcaactatgtggtccaggaagccattgtggtcattaaagacatcttccgcaag
taccccaacaagtacgagagtgtgatagccacactgtgtgagaatctggactcgctggat
gagcctgaggctcgcgctgctatgatctggatagtgggcgagtatgctgagcggattgac
aatgcggacgagctgcttgagagcttcctcgacggcttccatgacgagagcacccaggtc
cagctacagctgctgacagccattgtgaagctcttcctgaagaagccaacagagacgcag
gagctggtgcagcaggtcctcagtttggccactcaggactcggacaatccagaccttcgg
gaccgtggctacatctactggcgcctgctctccacggaccctgtagctgccaaagaggtg
gtactggctgagaagcccctcatctcagaagagacagaccttattgagcccacactgctg
gatgaactcatctgctacattggcacactggcctctgtctaccacaagccacccaatgcc
tttgtggagggcggccggggagtggtgcacaagagtctgccacctcgcactgcctcgagc
gaaagcacagagagccctgaggcagcccctgccggagcacctgctagtgaccagcctgat
gtcattcctgcccagggtgacctgttaggtgacctcctcaacctggaccttgggccccca
gtgagtggcccacccttggctgcctcctcagtgcagatgggagctgtggatcttcttggt
ggtggcctcgacagcctgatgggggatgagcctgaagggattggagacagcaactttggg
gcacctccagcatcagtggcggcggcagcaccagccagacttggagcacccgtcagcagt
ggcttaagtgacctctttgacctgaccagtggagtgggcaccctctcagggtcctatgtc
gctcccaaagcagtttggctccctgccatgaaggccaaggggctggaaatctctggcacc
ttcacccggcaggttggctccatctccatggatctgcagctgactaacaaggccctgcag
gtcatgacagatttcgctatccagtttaatcggaacagctttggcttggcccccgctgcg
ccactccaagtgcacgccccactgagccccaaccagacggtggagatctccctgcctctt
aacacggtgggctcagtcatgaagatggagcctctgaacaatcttcaggtggctgtgaag
aacaacattgacgtcttctacttcagcactttgtacccactgcatgtcctcttcgtggag
gacgggaagatggaccggcagatgttcctggccacatggaaggacattcccaacgagaat
gaagcccagttccagatcagagactgcccgctgaacacagaggctgcaagcagcaagctg
caaagcagtaacattttcactgtcgccaagaggactgtggagggccaggacatgctctac
caatctctgaagttgaccaatggcatctgggtgctggcagagctgcggatccagccaggc
aaccccagtttcacgctgtccctgaagtgtcgagcgccagaggtgtcccagcatgtatac
caggcctacgagaccatcctcaagaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (2)   
   RefSeq(pep) (6)   
DNA sequence (10)   
   RefSeq(nuc) (6)   
   GenBank (2)   
   EMBL (2)   
Protein domain (17)   
   Pfam (17)   
All databases (46)   

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