KEGG   Rattus norvegicus (rat): 29671
Entry
29671             CDS       T01003                                 
Symbol
Psma4
Name
(RefSeq) proteasome subunit alpha type-4
  KO
K02728  20S proteasome subunit alpha 3 [EC:3.4.25.1]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03050  Proteasome
rno05010  Alzheimer disease
rno05012  Parkinson disease
rno05014  Amyotrophic lateral sclerosis
rno05016  Huntington disease
rno05017  Spinocerebellar ataxia
rno05020  Prion disease
rno05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    29671 (Psma4)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    29671 (Psma4)
   05012 Parkinson disease
    29671 (Psma4)
   05014 Amyotrophic lateral sclerosis
    29671 (Psma4)
   05016 Huntington disease
    29671 (Psma4)
   05017 Spinocerebellar ataxia
    29671 (Psma4)
   05020 Prion disease
    29671 (Psma4)
   05022 Pathways of neurodegeneration - multiple diseases
    29671 (Psma4)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rno01002]
    29671 (Psma4)
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:rno03051]
    29671 (Psma4)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.25  Threonine endopeptidases
    3.4.25.1  proteasome endopeptidase complex
     29671 (Psma4)
Peptidases and inhibitors [BR:rno01002]
 Threonine peptidases
  Family T1: proteasome family
   29671 (Psma4)
Proteasome [BR:rno03051]
 Eukaryotic proteasome
  Core particles (20S proteasome)
   alpha type subunits
    29671 (Psma4)
SSDB
Motif
Pfam: Proteasome Proteasome_A_N TRP_N
Other DBs
NCBI-GeneID: 29671
NCBI-ProteinID: NP_058977
RGD: 61846
Ensembl: ENSRNOG00000013493
Vega: OTTRNOG00000002260
UniProt: P21670 A6J4N4
Structure
Position
8:64236520..64243980
AA seq 261 aa
MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF
FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQA
YTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYK
EGEMTLKSALALAVKVLNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQLIKKH
EEEEAKAEREKKEKEQREKDK
NT seq 786 nt   +upstreamnt  +downstreamnt
atgtctcgaagatatgactccaggaccacaatattttctccagaaggtcgcttataccaa
gtggaatatgccatggaagccattggacacgcaggcacttgtttgggaattttagccaat
gatggcgttctgcttgcagcagagaggcgcaacatccacaagcttcttgatgaagtcttt
ttttctgagaaaatttataaacttaacgaggacatggcttgcagtgtggcaggcataaca
tctgatgccaacgttctgactaatgaactcaggctcattgctcaaaggtacttattacag
tatcaggagccaattccctgtgagcagttggttacagcactgtgtgatatcaaacaggcg
tacacacagtttggaggcaaacgtccctttggtgtttctttgctgtatattggctgggat
aagcactatggctttcagctctatcagagtgacccaagtggaaactacgggggatggaaa
gccacatgcattggaaacaacagtgctgcagcggtatcaatgctgaaacaagactacaaa
gaaggagaaatgactctgaagtcagcgctggctctggctgtcaaggtgctaaacaagaca
atggatgttagtaaactgtcagctgaaaaagtggaaatcgccacactaacaagagagaat
ggaaagaccgtgatcagagtcctcaagcaaaaggaagtggaacagttgatcaaaaaacat
gaagaggaagaagcgaaagctgaacgggagaagaaagaaaaagaacagagagaaaaggat
aaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (8)   
   KEGG PATHWAY (8)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (26)   
   RefSeq(nuc) (2)   
   GenBank (12)   
   EMBL (12)   
3D Structure (5)   
   PDB (5)   
Protein domain (3)   
   Pfam (3)   
All databases (60)   

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